RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 ARMC12Q5T9G4 340 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 PRAMEF20Q5VT98 475 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 SASS6Q6UVJ0 657 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ZYG11AQ6WRX3 759 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 MROH5Q6ZUA9 1318 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 MTERF4Q7Z6M4 381 aaKnown RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 BCL9LQ86UU0 1499 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 PCP2Q8IVA1 136 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 LOXHD1Q8IVV2 1947 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 C12orf56Q8IXR9 622 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 Q8N976 141 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 LINC00301Q8NCQ3 95 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF596Q8TC21 504 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF396Q96N95 335 aaPredicted RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 TSNARE1Q96NA8 513 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 SERPINB12Q96P63 405 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 OR5B12Q96R08 314 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 BPIFA3Q9BQP9 254 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 MRPL37Q9BZE1 423 aaKnown RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 NOX3Q9HBY0 568 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 TNRC6CQ9HCJ0 1690 aaKnown RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 FGF20Q9NP95 211 aaPredicted RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 LHX9Q9NQ69 397 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 DUOX1Q9NRD9 1551 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 UVRAGQ9P2Y5 699 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 BAZ2BQ9UIF8 2168 aaKnown RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 THSD7AQ9UPZ6 1657 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ARFGEF1Q9Y6D6 1849 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ANKRD31Q8N7Z5 1873 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 KIF13BQ9NQT8 1826 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 NRXN2Q9P2S2 1712 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 COL4A1P02462 1669 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 UBN2Q6ZU65 1347 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 IGKV2-28A0A075B6P5 120 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 IGHV3-66A0A0C4DH42 116 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 GLYATL1P3A0A0U1RQE8 302 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 A0A1W2PP18 115 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CTAGE15A4D2H0 777 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 GOLGA6L4A6NEF3 574 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CCDC169A6NNP5 214 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 C9JVG2 144 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 H3BQV1 296 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CLOCKO15516 846 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ENTPD5O75356 428 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ERLIN1O75477 346 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CLPXO76031 633 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 IGKV2D-28P01615 120 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 FTH1P02794 183 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CRYGBP07316 175 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 GNAO1P09471 354 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ACSM4P0C7M7 580 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 FOLR1P15328 257 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 RPS2P15880 293 aaKnown RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF43P17038 809 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 U2AF2P26368 475 aaKnown RBP eCLIP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ADORA1P30542 326 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 RRM2P31350 389 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 FOXN2P32314 431 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CEACAM6P40199 344 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 NAA10P41227 235 aaPredicted RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CDKN2BP42772 138 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 PRMT2P55345 433 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 TRDNQ13061 729 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 SRSF5Q13243 272 aaKnown RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 MAB21L1Q13394 359 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 RCN1Q15293 331 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 POU2AF1Q16633 256 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 SOHLH1Q5JUK2 328 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 PPM1LQ5SGD2 360 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 C9orf135Q5VTT2 229 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF691Q5VV52 312 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 RAET1LQ5VY80 246 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ANKRD22Q5VYY1 191 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 FAM173BQ6P4H8 233 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 HDDC2Q7Z4H3 204 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CTAGE6Q86UF2 777 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 PRSS58Q8IYP2 241 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 STPG2Q8N412 459 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 OR10G2Q8NGC3 310 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 OR4S2Q8NH73 311 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 SYNPRQ8TBG9 265 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 RNF139Q8WU17 664 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 SLC38A4Q969I6 547 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CREB3L1Q96BA8 519 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 TM4SF18Q96CE8 201 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 C8orf76Q96K31 380 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF578Q96N58 590 aaPredicted RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 NAP1L5Q96NT1 182 aaPredicted RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 NDFIP1Q9BT67 221 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 LINC00597Q9H2U6 94 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 CWH43Q9H720 699 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 SLC40A1Q9NP59 571 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ISYNA1Q9NPH2 558 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 FAM49BQ9NUQ9 324 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 UXTQ9UBK9 157 aaPredicted RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 TRMT112Q9UI30 125 aaKnown RBP1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF222Q9UK12 451 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 TMED5Q9Y3A6 229 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 ARID1AO14497 2285 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 MYH11P35749 1972 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms