RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 FAM69BQ5VUD6 431 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 BAP18Q8IXM2 172 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 ZNF337Q9Y3M9 751 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 BPTFQ12830 3046 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 PLXNA2O75051 1894 aa14.4□□□□□ -0.1
PKP4-205ENST00000426248 QDPRP09417 244 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 CT62P0C5K7 136 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 MUC1P15941 1255 aaPredicted RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 BTF3P20290 206 aaKnown RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 MAPK3P27361 379 aaPredicted RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 CASRP41180 1078 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 EIF1AXP47813 144 aaKnown RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 CLDN6P56747 220 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 SNRPNP63162 240 aaKnown RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 PJVKQ0ZLH3 352 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 SURF2Q15527 256 aaPredicted RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 TMEM156Q8N614 296 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 OR4N2Q8NGD1 307 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 OR1J2Q8NGS2 313 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 OR2G2Q8NGZ5 317 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 ZNF649Q9BS31 505 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 C19orf25Q9UFG5 118 aaPredicted RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 ANKRD20A5PA0PJZ0 165 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 IDSB3KWA1 339 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 C21orf58P58505 322 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 MRPL2Q5T653 305 aaKnown RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 ZNF619Q8N2I2 560 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 SECTM1Q8WVN6 248 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 C14orf144Q96I85 54 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 NRIP2Q9BQI9 281 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 CCDC86Q9H6F5 360 aaKnown RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 KLRF1Q9NZS2 232 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 METTL1Q9UBP6 276 aaKnown RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 ABCA1O95477 2261 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 C4orf47A7E2U8 309 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 FOXS1O43638 330 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 CSF1P09603 554 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 RAB5AP20339 215 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 PRSS3P35030 304 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 LTBQ06643 244 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 OR2A2Q6IF42 318 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 TM4SF19Q96DZ7 209 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 ZNF559Q9BR84 538 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 SPACA1Q9HBV2 294 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 TMIGD3P0DMS9 266 aaPredicted RBP14.39□□□□□ -0.11
PKP4-205ENST00000426248 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 SDF2Q99470 211 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 HCAR1Q9BXC0 346 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 FBXL4Q9UKA2 621 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 SLC7A7Q9UM01 511 aa14.39□□□□□ -0.11
PKP4-205ENST00000426248 IFITM5A6NNB3 132 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 HRKO00198 91 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 PPP1R2P9O14990 202 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 DDTP30046 118 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 CCKBRP32239 447 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 IL13RA1P78552 427 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 ENTPD8Q5MY95 495 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 PWWP2BQ6NUJ5 590 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 C16orf52Q8NHV5 167 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 SMIM3Q9BZL3 60 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 ELOA3DA6NLF2 546 aaPredicted RBP14.38□□□□□ -0.11
PKP4-205ENST00000426248 COLCA2A8K830 154 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 H0YIG0 161 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 TSPAN15O95858 294 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 CCL4P13236 92 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 FABP4P15090 132 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 GAMTQ14353 236 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 EBPQ15125 230 aaKnown RBP14.38□□□□□ -0.11
PKP4-205ENST00000426248 ELOA3BQ3SY89 546 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 AWAT1Q58HT5 328 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 JMJD6Q6NYC1 403 aaPredicted RBP14.38□□□□□ -0.11
PKP4-205ENST00000426248 STEAP1BQ6NZ63 245 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 ELOA3Q8NG57 546 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 OR4K13Q8NH42 304 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 MFSD8Q8NHS3 518 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 OCIAD1Q9NX40 245 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 TRAV27A0A087WT01 109 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 UNC119BA6NIH7 251 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 GSTZ1O43708 216 aaPredicted RBP14.38□□□□□ -0.11
PKP4-205ENST00000426248 SLC34A2O95436 690 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 PPP1R3DO95685 299 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 CYB5AP00167 134 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 PRTGQ2VWP7 1150 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 LANCL3Q6ZV70 420 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 FAM220AQ7Z4H9 259 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 CHST4Q8NCG5 386 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 TSEN15Q8WW01 171 aaKnown RBP14.38□□□□□ -0.11
PKP4-205ENST00000426248 SPOCK3Q9BQ16 436 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 MKKSQ9NPJ1 570 aaPredicted RBP14.38□□□□□ -0.11
PKP4-205ENST00000426248 CSAG2Q9Y5P2 127 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 PLXNB3Q9ULL4 1909 aa14.38□□□□□ -0.11
PKP4-205ENST00000426248 A0A1W2PPE2 198 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 CYR61O00622 381 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 AK1P00568 194 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 SPCS3P61009 180 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 CRMP1Q14194 572 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 DHRS13Q6UX07 377 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 FBXO34Q9NWN3 711 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 TAS2R8Q9NYW2 309 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms