RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 TMCC3Q9ULS5 477 aa4.85□□□□□ -1.63
LINC00458-201ENST00000423442 SAMD4AQ9UPU9 718 aaKnown RBP4.85□□□□□ -1.63
LINC00458-201ENST00000423442 AURKCQ9UQB9 309 aa4.85□□□□□ -1.63
LINC00458-201ENST00000423442 FKBP7Q9Y680 259 aa4.85□□□□□ -1.63
LINC00458-201ENST00000423442 IGHV1-18A0A0C4DH31 117 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 SH3PXD2BA1X283 911 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CENPBD1B2RD01 187 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 LRRN3E7EW58 273 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 FXYD1O00168 92 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 NME4O00746 187 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 DYNC1I1O14576 645 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 DHHO43323 396 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TRAF3IP2O43734 574 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 HLA-HP01893 362 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 MT-ND5P03915 603 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 SERPINA5P05154 406 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 ASAH2BP0C7U1 165 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 PSG1P11464 419 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 B4GALT1P15291 398 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 ACADSP16219 412 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TCN1P20061 433 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TNFRSF1BP20333 461 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 RRM2P31350 389 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 ACVR1BP36896 505 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 IFNGR2P38484 337 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 AQP2P41181 271 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 SLC9A3P48764 834 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 GSK3BP49841 420 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 RPL27P61353 136 aaKnown RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 PCBD1P61457 104 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TUBA1BP68363 451 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 VLDLRP98155 873 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 NAAAQ02083 359 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 HSF2Q03933 536 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 PRKCDQ05655 676 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 RPL18Q07020 188 aaKnown RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CD47Q08722 323 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 ZIK1Q3SY52 487 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CHRFAM7AQ494W8 412 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 ZBED5Q49AG3 693 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 IQCCQ4KMZ1 466 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 ALG10Q5BKT4 473 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 FAM205BPQ63HN1 556 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 C16orf54Q6UWD8 224 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TUBA1AQ71U36 451 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 VTCN1Q7Z7D3 282 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 MDP1Q86V88 176 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TMEM123Q8N131 208 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 SLC22A24Q8N4F4 322 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 SYT14Q8NB59 555 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 OR51A7Q8NH64 312 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 C11orf40Q8WZ69 217 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TMEM54Q969K7 222 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 NSL1Q96IY1 281 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 PRRC1Q96M27 445 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 C19orf24Q9BVV8 132 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 RSPO3Q9BXY4 272 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TXNIPQ9H3M7 391 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 C1orf198Q9H425 327 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 PLK3Q9H4B4 646 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 NMNAT1Q9HAN9 279 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 SIAEQ9HAT2 523 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CDH20Q9HBT6 801 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 DYNLRB1Q9NP97 96 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 MYOZ1Q9NP98 299 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 MEPEQ9NQ76 525 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CA10Q9NS85 328 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TBC1D23Q9NUY8 699 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 DCAF13Q9NV06 445 aaKnown RBP4.84□□□□□ -1.63
LINC00458-201ENST00000423442 TMEM5Q9Y2B1 443 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CMAHPQ9Y471 501 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 MEGF8Q7Z7M0 2845 aa4.84□□□□□ -1.63
LINC00458-201ENST00000423442 CR1P17927 2039 aa4.84□□□□□ -1.64
LINC00458-201ENST00000423442 PLCE1Q9P212 2302 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 ARFGEF3Q5TH69 2177 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 LOC390937A0A1W2PQ73 354 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 FAM90A8PA6NJQ4 464 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 H7C417 338 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 TLX2O43763 284 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-201ENST00000423442 AHCYL1O43865 530 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 SEC14L2O76054 403 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 PDE5AO76074 875 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 IGKV3-15P01624 115 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 IGHV4-39P01824 125 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 THY1P04216 161 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 LCKP06239 509 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 H1F0P07305 194 aaKnown RBP4.83□□□□□ -1.64
LINC00458-201ENST00000423442 FAM90A13PP0C7W8 464 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 FAM90A24PP0C7X0 464 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 CECR9P0C854 216 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 SLC25A16P16260 332 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 NCK1P16333 377 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 CCNOP22674 350 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 APLNRP35414 380 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 THBS4P35443 961 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 PDLIM4P50479 330 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 UGT2B15P54855 530 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 MYBPC1Q00872 1141 aa4.83□□□□□ -1.64
LINC00458-201ENST00000423442 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms