RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TUBG1P23258 451 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ATP6V1E1P36543 226 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 MPV17P39210 176 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 PRKXP51817 358 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 EFNA4P52798 201 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 HCCSP53701 268 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 GRB2P62993 217 aaKnown RBP13.51□□□□□ -0.25
BRAT1-202ENST00000421712 RSPO1Q2MKA7 263 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-202ENST00000421712 AADACL4Q5VUY2 407 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 PRSS57Q6UWY2 283 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-202ENST00000421712 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF283Q8N7M2 679 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF555Q8NEP9 628 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 WFDC11Q8NEX6 87 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 OTOSQ8NHW6 89 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ST7LQ8TDW4 575 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 TRUB1Q8WWH5 349 aaKnown RBP13.51□□□□□ -0.25
BRAT1-202ENST00000421712 UBE2FQ969M7 185 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 CMBLQ96DG6 245 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF799Q96GE5 643 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 Q96MF0 132 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 SORCS2Q96PQ0 1159 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 MBOAT4Q96T53 435 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 MS4A5Q9H3V2 200 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 POFUT1Q9H488 388 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 TUBG2Q9NRH3 451 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 DDX28Q9NUL7 540 aaKnown RBP13.51□□□□□ -0.25
BRAT1-202ENST00000421712 SMPD3Q9NY59 655 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-202ENST00000421712 DNAJC27Q9NZQ0 273 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 LOC100130705A0A1B0GUX0 176 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 PLSCR5A0PG75 271 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 TIMM8AO60220 97 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-202ENST00000421712 ICMTO60725 284 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 F12P00748 615 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-202ENST00000421712 PEX2P28328 305 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 MALLQ13021 153 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 CARTPTQ16568 116 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 CLEC12BQ2HXU8 276 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 MBNL2Q5VZF2 373 aaKnown RBP13.5□□□□□ -0.25
BRAT1-202ENST00000421712 SPNS3Q6ZMD2 512 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 RFKQ969G6 155 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 CNN2Q99439 309 aaKnown RBP13.5□□□□□ -0.25
BRAT1-202ENST00000421712 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 C8orf4Q9NR00 106 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 FAM118AQ9NWS6 357 aa13.5□□□□□ -0.25
BRAT1-202ENST00000421712 IGLV3-9A0A075B6K5 115 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 H3BSA7 217 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 J3QW42 95 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 TPD52L2O43399 206 aaKnown RBP13.49□□□□□ -0.25
BRAT1-202ENST00000421712 LY6HO94772 140 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 IGHV3-13P01766 116 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 ANXA2P07355 339 aaKnown RBP13.49□□□□□ -0.25
BRAT1-202ENST00000421712 HLXQ14774 488 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-202ENST00000421712 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 DRAM2Q6UX65 266 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 TGIF2LYQ8IUE0 185 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 NEU4Q8WWR8 484 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-202ENST00000421712 AMELYQ99218 206 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 C1QTNF5Q9BXJ0 243 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 BRD7Q9NPI1 651 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 WARS2Q9UGM6 360 aaKnown RBP13.49□□□□□ -0.25
BRAT1-202ENST00000421712 TMEM14AQ9Y6G1 99 aa13.49□□□□□ -0.25
BRAT1-202ENST00000421712 TBX1O43435 398 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 APOC1P02654 83 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 SLC2A1P11166 492 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 HTR1FP30939 366 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 CX3CR1P49238 355 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 PSG7Q13046 419 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-202ENST00000421712 CLEC2AQ6UVW9 174 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 KRT77Q7Z794 578 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 KRTAP1-3Q8IUG1 177 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 SLC35F2Q8IXU6 374 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 RNF133Q8WVZ7 376 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 CYGBQ8WWM9 190 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 RDH12Q96NR8 316 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 RHNO1Q9BSD3 238 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 TTTY10Q9BZA0 68 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 VCXQ9H320 206 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 PURGQ9UJV8 347 aaKnown RBP13.48□□□□□ -0.25
BRAT1-202ENST00000421712 KLHDC2Q9Y2U9 406 aa13.48□□□□□ -0.25
BRAT1-202ENST00000421712 SNTNA6NMZ2 147 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF670-ZNF695F2Z2N8 137 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 PSMD9O00233 223 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 SPRY3O43610 288 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ENTPD6O75354 484 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 APOL3O95236 402 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 RAC2P15153 192 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ALOX5APP20292 161 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 LIPAP38571 399 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 OPRL1P41146 370 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF81P51508 661 aa13.47□□□□□ -0.25
BRAT1-202ENST00000421712 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
BRAT1-202ENST00000421712 SLC34A1Q06495 639 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms