RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KCNJ15Q99712 375 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 ABHD6Q9BV23 337 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 SMPD3Q9NY59 655 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 HAO2Q9NYQ3 351 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 TAAR3PQ9P1P4 343 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 WARS2Q9UGM6 360 aaKnown RBP19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 LAMP5Q9UJQ1 280 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 STARD10Q9Y365 291 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 TMEM14AQ9Y6G1 99 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 CCDC168Q8NDH2 2452 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 F8P00451 2351 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 H0YHG0 523 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 M0R135 149 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 CLPTM1O96005 669 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 F12P00748 615 aaPredicted RBP19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 IGHV4-39P01824 125 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 APOC1P02654 83 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 GGTLC2Q14390 218 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 LPCAT4Q643R3 524 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 DRAM2Q6UX65 266 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 RNF133Q8WVZ7 376 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 ZNF799Q96GE5 643 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 CNN2Q99439 309 aaKnown RBP19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 C1QTNF5Q9BXJ0 243 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 FAM118AQ9NWS6 357 aa19.8■□□□□ 0.76
SMARCB1-205ENST00000417137 LOC100130705A0A1B0GUX0 176 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 E9PQ18 207 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 LCATP04180 440 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 HSD11B1P28845 292 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 LIPAP38571 399 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 SLC6A9P48067 706 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 TMED1Q13445 227 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 MEDAGQ5VYS4 303 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 COLCA1Q6ZS62 124 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 NEU4Q8WWR8 484 aaPredicted RBP19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 MNTQ99583 582 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 SP140LQ9H930 580 aa19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 MYEF2Q9P2K5 600 aaKnown RBP19.79■□□□□ 0.76
SMARCB1-205ENST00000417137 SNTNA6NMZ2 147 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 CASQ2O14958 399 aaPredicted RBP19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 MPZL2O60487 215 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 NDUFS7O75251 213 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 H2BFMP0C1H6 154 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 HTR1FP30939 366 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 OTX1P32242 354 aaPredicted RBP19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 MPV17P39210 176 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 ALDH3B1P43353 468 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 SNRPGP62308 76 aaKnown RBP19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 POU4F2Q12837 409 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 MALLQ13021 153 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 SLC25A30Q5SVS4 291 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 KCTD18Q6PI47 426 aaPredicted RBP19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 SPATC1Q76KD6 591 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 CMBLQ96DG6 245 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 ZNF582Q96NG8 517 aaPredicted RBP19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 VCXQ9H320 206 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 CYSLTR2Q9NS75 346 aa19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 CGGBP1Q9UFW8 167 aaPredicted RBP19.78■□□□□ 0.76
SMARCB1-205ENST00000417137 PLSCR5A0PG75 271 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 SLC16A6O15403 523 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 SSX4O60224 188 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 MRPL3P09001 348 aaKnown RBP19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 RAC2P15153 192 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 ALOX5APP20292 161 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 PEX2P28328 305 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 ATP6V1E1P36543 226 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 PRKXP51817 358 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 DSCR9P59020 149 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 SLC34A1Q06495 639 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 MAD2L1BPQ15013 274 aaPredicted RBP19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 TGIF2LYQ8IUE0 185 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 ZNF283Q8N7M2 679 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 WFDC11Q8NEX6 87 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 ASB17Q8WXJ9 295 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 HAVCR1Q96D42 359 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 SORCS2Q96PQ0 1159 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 USF3Q68DE3 2245 aa19.77■□□□□ 0.76
SMARCB1-205ENST00000417137 RTTNQ86VV8 2226 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 PHYHO14832 338 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 TIMM8AO60220 97 aaPredicted RBP19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 OPRL1P41146 370 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 PSG7Q13046 419 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 OCLNQ16625 522 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 CLEC12BQ2HXU8 276 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 ZMAT1Q5H9K5 638 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 OGFRL1Q5TC84 451 aaPredicted RBP19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 FBXW12Q6X9E4 464 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 NAA40Q86UY6 237 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 KRTAP1-3Q8IUG1 177 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 UBE2FQ969M7 185 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 APOL4Q9BPW4 351 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 NIPAL2Q9H841 368 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 PTTG3PQ9NZH4 202 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 DNAJC27Q9NZQ0 273 aa19.76■□□□□ 0.75
SMARCB1-205ENST00000417137 NAT2P11245 290 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 KITLGP21583 273 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 HCCSP53701 268 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 PCGF3Q3KNV8 242 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms