RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 C8orf82Q6P1X6 216 aaPredicted RBP12.09□□□□□ -0.47
PAF1-202ENST00000416728 LRRN1Q6UXK5 716 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 HIST2H3AQ71DI3 136 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 MOGAT3Q86VF5 341 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 KLBQ86Z14 1044 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 C1orf87Q8N0U7 546 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 PARP8Q8N3A8 854 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 TSSK2Q96PF2 358 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 SLC30A2Q9BRI3 323 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 HCAR1Q9BXC0 346 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 WDR76Q9H967 626 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 MGAM2Q2M2H8 2515 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 IGHV3OR16-10A0A075B7F0 116 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 F5H5P2 479 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 H0YL77 283 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 CLDN34H7C241 214 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 DCTN6O00399 190 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 MLNRO43193 412 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 IGHV4-38-2P0DP08 117 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 SELEP16581 610 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 PAX2Q02962 417 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 COX10Q12887 443 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 KRT72Q14CN4 511 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 SEC23BQ15437 767 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 ZNF181Q2M3W8 571 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 CORO6Q6QEF8 472 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 SMARCD3Q6STE5 483 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 HACD2Q6Y1H2 254 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 NLRC3Q7RTR2 1065 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 RAB40AQ8WXH6 277 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 UPRTQ96BW1 309 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
PAF1-202ENST00000416728 ERMAPQ96PL5 475 aaPredicted RBP12.08□□□□□ -0.48
PAF1-202ENST00000416728 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 CCDC134Q9H6E4 229 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 ZNF696Q9H7X3 374 aa12.08□□□□□ -0.48
PAF1-202ENST00000416728 IGLV1-36A0A0B4J1U3 117 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 IGHV2-70DA0A0C4DH43 119 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 DIRAS1O95057 198 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 FSTL3O95633 263 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 PPP1R3DO95685 299 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 IRF2P14316 349 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 FPR3P25089 353 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 IL13RA1P78552 427 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 LEG1Q6P5S2 330 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 C9orf139Q6ZV77 190 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 OR52J3Q8NH60 311 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 FANK1Q8TC84 345 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 C7orf34Q96L11 122 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 UNKLQ9H9P5 680 aaKnown RBP12.07□□□□□ -0.48
PAF1-202ENST00000416728 SRA1Q9HD15 236 aaKnown RBP12.07□□□□□ -0.48
PAF1-202ENST00000416728 TMEM100Q9NV29 134 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 B9D1Q9UPM9 204 aa12.07□□□□□ -0.48
PAF1-202ENST00000416728 SAMD4AQ9UPU9 718 aaKnown RBP12.07□□□□□ -0.48
PAF1-202ENST00000416728 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
PAF1-202ENST00000416728 GMNNO75496 209 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 PLATP00750 562 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 RENP00797 406 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 HLA-DPB1P04440 258 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 SLC6A6P31641 620 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 MDH1P40925 334 aaKnown RBP12.06□□□□□ -0.48
PAF1-202ENST00000416728 PITPNBP48739 271 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 PRSS12P56730 875 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 PSME3P61289 254 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 GLYATQ6IB77 296 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 OR6V1Q8N148 313 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 SLC26A10Q8NG04 563 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 DACT3Q96B18 629 aaPredicted RBP12.06□□□□□ -0.48
PAF1-202ENST00000416728 DHRS1Q96LJ7 313 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 NMNAT3Q96T66 252 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 PITX2Q99697 317 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 CDADC1Q9BWV3 514 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 DCAF13Q9NV06 445 aaKnown RBP12.06□□□□□ -0.48
PAF1-202ENST00000416728 ABCD2Q9UBJ2 740 aa12.06□□□□□ -0.48
PAF1-202ENST00000416728 KIR2DS1A0A191URI9 304 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 A0A1B0GWJ7 208 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 F5H5K5 113 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 ACSM4P0C7M7 580 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 PMELP40967 661 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 GATA4P43694 442 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 SMIM11AP58511 58 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 ECH1Q13011 328 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 MALLQ13021 153 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 GK2Q14410 553 aaPredicted RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 RSPO1Q2MKA7 263 aaPredicted RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 RFX4Q33E94 735 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 KRTAP27-1Q3LI81 207 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 SLC36A3Q495N2 470 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms