RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DNM1P34Q6PK57 102 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 C16orf89Q6UX73 402 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 C1QL2Q7Z5L3 287 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 NAA40Q86UY6 237 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 CYB561A3Q8NBI2 242 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 BHLHE23Q8NDY6 225 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 OR4M2Q8NGB6 313 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 OR52E2Q8NGJ4 325 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 ZNF420Q8TAQ5 688 aaPredicted RBP12.71□□□□□ -0.37
UBXN4-203ENST00000416538 APOBEC3DQ96AK3 386 aaPredicted RBP12.71□□□□□ -0.37
UBXN4-203ENST00000416538 MCUR1Q96AQ8 359 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 MMP26Q9NRE1 261 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 CYB5R1Q9UHQ9 305 aa12.71□□□□□ -0.37
UBXN4-203ENST00000416538 F5H0A9 414 aaPredicted RBP12.7□□□□□ -0.38
UBXN4-203ENST00000416538 J3QW42 95 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 DCTN3O75935 186 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 RENP00797 406 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 SBK2P0C263 348 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 TUBG1P23258 451 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 HMGA2P52926 109 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
UBXN4-203ENST00000416538 DCAF12L2Q5VW00 463 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 LIPNQ5VXI9 398 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 PGM2L1Q6PCE3 622 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 DEFB108BQ8NET1 73 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 GJC3Q8NFK1 279 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 OR4Q3Q8NH05 313 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 GNPDA2Q8TDQ7 276 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 PTP4A1Q93096 173 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 MEGF10Q96KG7 1140 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 GCM1Q9NP62 436 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 TUBG2Q9NRH3 451 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 ACTR3BQ9P1U1 418 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 IL19Q9UHD0 177 aa12.7□□□□□ -0.38
UBXN4-203ENST00000416538 A0A1B0GWJ7 208 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 IQCF6A8MYZ5 107 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 F5H5P2 479 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 TRAPPC2LH3BP13 241 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 ZNF205O95201 554 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 RGS6P49758 472 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 BTG1P62324 171 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 MXRA7P84157 204 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 MS4A2Q01362 244 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 TRAP1Q12931 704 aaKnown RBP12.69□□□□□ -0.38
UBXN4-203ENST00000416538 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 LCN8Q6JVE9 175 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 OR9Q1Q8NGQ5 310 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 SLC6A7Q99884 636 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 SLC30A2Q9BRI3 323 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 C1QTNF5Q9BXJ0 243 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 PATZ1Q9HBE1 687 aaKnown RBP12.69□□□□□ -0.38
UBXN4-203ENST00000416538 ESM1Q9NQ30 184 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 TMCC3Q9ULS5 477 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 PPP1R3CQ9UQK1 317 aa12.69□□□□□ -0.38
UBXN4-203ENST00000416538 A8MXK9 166 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 B2RBV5 119 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 TMEM178BH3BS89 294 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 TNFRSF11BO00300 401 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 SOX14O95416 240 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 CYB5R3P00387 301 aaPredicted RBP12.68□□□□□ -0.38
UBXN4-203ENST00000416538 GASTP01350 101 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 T-ENOLP0DO92 83 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 ANPEPP15144 967 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 TNFRSF1AP19438 455 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 TNFSF4P23510 183 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 NOS3P29474 1203 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 PMELP40967 661 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 HILS1P60008 231 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 GK2Q14410 553 aaPredicted RBP12.68□□□□□ -0.38
UBXN4-203ENST00000416538 TUSC1Q2TAM9 212 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 SNAI3Q3KNW1 292 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 SPATS1Q496A3 300 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 TMEM155Q4W5P6 130 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
UBXN4-203ENST00000416538 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 COG8Q96MW5 612 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 PITX2Q99697 317 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 ATF6BQ99941 703 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 COMMD3-BMI1R4GMX3 469 aa12.68□□□□□ -0.38
UBXN4-203ENST00000416538 CEACAM18A8MTB9 384 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 F5H5K5 113 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 J3QLI3 93 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 IDH3BO43837 385 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 GYPBP06028 91 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 CLUP10909 449 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 OTX1P32242 354 aaPredicted RBP12.67□□□□□ -0.38
UBXN4-203ENST00000416538 IFNGR2P38484 337 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 CRMP1Q14194 572 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 KLF17Q5JT82 389 aaPredicted RBP12.67□□□□□ -0.38
UBXN4-203ENST00000416538 RASSF6Q6ZTQ3 369 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 PEG10Q86TG7 708 aaKnown RBP12.67□□□□□ -0.38
UBXN4-203ENST00000416538 ATG16L2Q8NAA4 619 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 AQP11Q8NBQ7 271 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 C22orf15Q8WYQ4 148 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms