RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PRPF19Q9UMS4 504 aaKnown RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 MOKQ9UQ07 419 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 AURKCQ9UQB9 309 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 LAMP3Q9UQV4 416 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 POFUT2Q9Y2G5 429 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 AMDHD2Q9Y303 409 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 MAGED1Q9Y5V3 778 aaPredicted RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 SIRT4Q9Y6E7 314 aaPredicted RBP4.22□□□□□ -1.73
VPS41-205ENST00000414632 U3KQV3 271 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
VPS41-205ENST00000414632 CR1P17927 2039 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 MED13LQ71F56 2210 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 OR6C68A6NDL8 312 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 OR6C65A6NJZ3 312 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ZNF99A8MXY4 864 aaPredicted RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 RPL36A-HNRNPH2H7BZ11 118 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 TNFRSF11BO00300 401 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SOCS2O14508 198 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 HS3ST1O14792 307 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ARHGEF9O43307 516 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SMPD2O60906 423 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 NDUFS7O75251 213 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 GOSR1O95249 250 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 STAMBPO95630 424 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 PPP1R3DO95685 299 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 IGFBP1P08833 259 aaPredicted RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 TSPAN19P0C672 248 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 CECR9P0C854 216 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 HKR1P10072 659 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 CCL2P13500 99 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ACADSP16219 412 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ITGA2P17301 1181 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 CALCRP30988 508 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 CDAP32320 146 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 PSMB10P40306 273 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 OMPP47874 163 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 FABP6P51161 128 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 DAP3P51398 398 aaKnown RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 SH3BGRP55822 239 aaPredicted RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 FXYD6P3P58550 94 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 RPL27P61353 136 aaKnown RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 RPS4XP62701 263 aaKnown RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 CBX1P83916 185 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 CHRNB3Q05901 458 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 DGCR6Q14129 220 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 FLOT2Q14254 428 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SGCAQ16586 387 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 PGGHGQ32M88 737 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ZNF672Q499Z4 452 aaPredicted RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 ZBED5Q49AG3 693 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 DNAL1Q4LDG9 190 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 MESTQ5EB52 335 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 Q5PR19 223 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ARMC4Q5T2S8 1044 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 KRT80Q6KB66 452 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 TMPRSS11FQ6ZWK6 438 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 KRT74Q7RTS7 529 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ZER1Q7Z7L7 766 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 P2RY8Q86VZ1 359 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SPATA24Q86W54 205 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 CDK20Q8IZL9 346 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 RNF113BQ8IZP6 322 aaKnown RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 ARHGAP24Q8N264 748 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 C17orf78Q8N4C9 275 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SLC22A24Q8N4F4 322 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 TMEM116Q8NCL8 245 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 WFDC11Q8NEX6 87 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 FANK1Q8TC84 345 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SMAP2Q8WU79 429 aaPredicted RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 LIPHQ8WWY8 451 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ASB9Q96DX5 294 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 FBXO17Q96EF6 278 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SAMD8Q96LT4 415 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 Q96M85 177 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ADAD1Q96M93 576 aaKnown RBP4.21□□□□□ -1.74
VPS41-205ENST00000414632 ZNF570Q96NI8 536 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 SLC38A2Q96QD8 506 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 BTBD10Q9BSF8 475 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 C1orf21Q9H246 121 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 TXNIPQ9H3M7 391 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 FN3KQ9H479 309 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 EGLN3Q9H6Z9 239 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 IL1RAPQ9NPH3 570 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 TMEM38BQ9NVV0 291 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 NLKQ9UBE8 527 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 TMCC3Q9ULS5 477 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 DHDHQ9UQ10 334 aa4.21□□□□□ -1.74
VPS41-205ENST00000414632 ARFGEF3Q5TH69 2177 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 USF3Q68DE3 2245 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ARPC4-TTLL3A0A0A6YYG9 625 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 A0A1W2PQ09 198 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DHRS12A0PJE2 317 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ACOT8O14734 319 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 NDUFB2O95178 105 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SOX14O95416 240 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 RAB36O95755 333 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 IGF2P01344 180 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 CD8AP01732 235 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 IGHMP01871 453 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 HLA-DQA2P01906 255 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms