RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RBMXL3Q8N7X1 1067 aaKnown RBP15.61■□□□□ 0.09
PHRF1-202ENST00000413872 DRAXINQ8NBI3 349 aaPredicted RBP15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SLC38A9Q8NBW4 561 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 ZNF391Q9UJN7 358 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 ZNF831Q5JPB2 1677 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 C21orf140B9A014 251 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 HS3ST1O14792 307 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 AGERQ15109 404 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 OR52W1Q6IF63 320 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 OR2Y1Q8NGV0 311 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 GON7Q9BXV9 100 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 MMP25Q9NPA2 562 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 HPP00738 406 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SRD5A2P31213 254 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SHEQ5VZ18 495 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 OR2AE1Q8NHA4 323 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 M1APQ8TC57 530 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SLAMF9Q96A28 289 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 DAZAP1Q96EP5 407 aaKnown RBP15.61■□□□□ 0.09
PHRF1-202ENST00000413872 PCOLCE2Q9UKZ9 415 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SCN4AP35499 1836 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 M0QYG6 137 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 EFSO43281 561 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 ALDH3B1P43353 468 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 ZNF117Q03924 483 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 IAH1Q2TAA2 248 aaPredicted RBP15.61■□□□□ 0.09
PHRF1-202ENST00000413872 OR10G3Q8NGC4 313 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 GPATCH2Q9NW75 528 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SLC25A1P53007 311 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 GALNT16Q8N428 558 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SUMF2Q8NBJ7 301 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 PP6455Q8WZ26 134 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 SHARPINQ9H0F6 387 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 PLA2G3Q9NZ20 509 aa15.61■□□□□ 0.09
PHRF1-202ENST00000413872 AGAP14A8MT82 685 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TBPP20226 339 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 ZMAT3Q9HA38 289 aaKnown RBP15.6■□□□□ 0.09
PHRF1-202ENST00000413872 EXOSC3Q9NQT5 275 aaKnown RBP15.6■□□□□ 0.09
PHRF1-202ENST00000413872 APEHP13798 732 aaKnown RBP15.6■□□□□ 0.09
PHRF1-202ENST00000413872 PPP3CBP16298 524 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 GALNSP34059 522 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 HNF4GQ14541 408 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 HEPHL1Q6MZM0 1159 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 ZNF225Q9UK10 706 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 A4GNTQ9UNA3 340 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 FAM157BP0CG42 384 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 PWWP2BQ6NUJ5 590 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 ANKRD16Q6P6B7 361 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 RBMS3Q6XE24 437 aaKnown RBP15.6■□□□□ 0.09
PHRF1-202ENST00000413872 D2HGDHQ8N465 521 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TCTEX1D2Q8WW35 142 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 SIRT5Q9NXA8 310 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 IL20Q9NYY1 176 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TIMM8BQ9Y5J9 83 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-202ENST00000413872 KCNE3Q9Y6H6 103 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 COL11A2P13942 1736 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-202ENST00000413872 MOSPD3O75425 235 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TNFRSF1AP19438 455 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TGM4P49221 684 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 C21orf58P58505 322 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TLE4Q04727 773 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TPBGQ13641 420 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 PAQR6Q6TCH4 344 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 HAS2Q92819 552 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 S1PR3Q99500 378 aa15.6■□□□□ 0.09
PHRF1-202ENST00000413872 TERTO14746 1132 aaKnown RBP15.59■□□□□ 0.09
PHRF1-202ENST00000413872 DFFBO76075 338 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 TGM6O95932 706 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 RAC1P63000 192 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 SMIM21Q3B7S5 101 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 STEAP3Q658P3 488 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 PLPP5Q8NEB5 264 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 OR2G2Q8NGZ5 317 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 COL4A5P29400 1685 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 THBS4P35443 961 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 HCCSP53701 268 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 KRBOX4Q5JUW0 171 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 C3orf49Q96BT1 292 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 AADACP22760 399 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 WNT3P56703 355 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 BTG1P62324 171 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 RAB35Q15286 201 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 TIGD3Q6B0B8 471 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 H2BFWTQ7Z2G1 175 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 TMEM200AQ86VY9 491 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 ZNF385DQ9H6B1 395 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 QPCTLQ9NXS2 382 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 CACFD1Q9UGQ2 172 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 CELA2BP08218 269 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-202ENST00000413872 FUT6P51993 359 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 AGFG1P52594 562 aaKnown RBP15.59■□□□□ 0.09
PHRF1-202ENST00000413872 GSG1Q2KHT4 349 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 CATSPERDQ86XM0 798 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 OR4C3Q8NH37 302 aa15.59■□□□□ 0.09
PHRF1-202ENST00000413872 KTI12Q96EK9 354 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-202ENST00000413872 ALKBH3Q96Q83 286 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-202ENST00000413872 MEIKINA0A087WXM9 373 aa15.58■□□□□ 0.09
PHRF1-202ENST00000413872 CCDC163A0A0D9SF12 145 aa15.58■□□□□ 0.09
PHRF1-202ENST00000413872 ARPC3O15145 178 aa15.58■□□□□ 0.09
PHRF1-202ENST00000413872 CNIH1O95406 144 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms