RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MUC6Q6W4X9 2439 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 SURF4O15260 269 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 MGST1P10620 155 aaKnown RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 TDGF1P13385 188 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ACTBP60709 375 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ACTG1P63261 375 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 CLN3Q13286 438 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 SNTB2Q13425 540 aaKnown RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 CNN3Q15417 329 aaKnown RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ACSM3Q53FZ2 586 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 GGNBP1Q5YKI7 109 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF627Q7L945 461 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 OR13C5Q8NGS8 318 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ROBO4Q8WZ75 1007 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 FOXRED1Q96CU9 486 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 CENPOQ9BU64 300 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 OR2J1Q9GZK6 312 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 RANBP3Q9H6Z4 567 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 PLEKHA3Q9HB20 300 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 RAB22AQ9UL26 194 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF281Q9Y2X9 895 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 HEATR5BQ9P2D3 2071 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ARID1BQ8NFD5 2236 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF878C9JN71 531 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 HTD2P86397 168 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 CLVS2Q5SYC1 327 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 C3P1Q6ZMU1 363 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 C10orf111Q8N326 155 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 RAB40AQ8WXH6 277 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 BORCS8Q96FH0 119 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 FGF20Q9NP95 211 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-211ENST00000413186 BET1LQ9NYM9 111 aa7.66□□□□□ -1.18
SYNE1-211ENST00000413186 DMDP11532 3685 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 NUPL2O15504 423 aaKnown RBP7.65□□□□□ -1.18
SYNE1-211ENST00000413186 PRAF2O60831 178 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 IGKV1D-16P01601 117 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 RD3LP0DJH9 198 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 GTF2F2P13984 249 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 FUT4P22083 530 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 TNFSF8P32971 234 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 GP2P55259 537 aaKnown RBP7.65□□□□□ -1.18
SYNE1-211ENST00000413186 RPS23P62266 143 aaKnown RBP7.65□□□□□ -1.18
SYNE1-211ENST00000413186 ATXN7L3Q14CW9 347 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-211ENST00000413186 MEP1BQ16820 701 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 TBC1D28Q2M2D7 210 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 WDR88Q6ZMY6 472 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 THAP6Q8TBB0 222 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 SUCNR1Q9BXA5 334 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 ENY2Q9NPA8 101 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 ASF1BQ9NVP2 202 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 NPAP1Q9NZP6 1156 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 FLRT3Q9NZU0 649 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 M0R2Z0 102 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 CYTIPO60759 359 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 HOXD4P09016 255 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-211ENST00000413186 RAB3AP20336 220 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 PSMB10P40306 273 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 SLC25A1P53007 311 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 FAM58AQ8N1B3 248 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 PARP16Q8N5Y8 322 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 APCDD1LQ8NCL9 501 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 FAM83FQ8NEG4 500 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-211ENST00000413186 NOXO1Q8NFA2 376 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 OR5A2Q8NGI9 324 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 IMMP1LQ96LU5 166 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 DOK1Q99704 481 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 SLCO5A1Q9H2Y9 848 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 GLTPQ9NZD2 209 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 LUZP4Q9P127 313 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 POMT1Q9Y6A1 747 aa7.65□□□□□ -1.18
SYNE1-211ENST00000413186 A0A1B0GV50 99 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 GABRPO00591 440 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 CELA2AP08217 269 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 UBCP0CG48 685 aaKnown RBP7.65□□□□□ -1.19
SYNE1-211ENST00000413186 NR4A2P43354 598 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 PTTG1IPP53801 180 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 TOMM34Q15785 309 aaPredicted RBP7.65□□□□□ -1.19
SYNE1-211ENST00000413186 RAB11BQ15907 218 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 FOXB2Q5VYV0 432 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 Q6ZNX1 250 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 SNX29P2Q8IUI4 249 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 TRMT10AQ8TBZ6 339 aaKnown RBP7.65□□□□□ -1.19
SYNE1-211ENST00000413186 YIPF6Q96EC8 236 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 FUZQ9BT04 418 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF416Q9BWM5 594 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 TXNL4BQ9NX01 149 aaKnown RBP7.65□□□□□ -1.19
SYNE1-211ENST00000413186 ERVK13-1Q9NX77 482 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 HRH3Q9Y5N1 445 aa7.65□□□□□ -1.19
SYNE1-211ENST00000413186 PIGBOS1A0A0B4J2F0 54 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 DOK2O60496 412 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 CREBL2O60519 120 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-211ENST00000413186 PMS2P2O95744 297 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 POU3F4P49335 361 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 BLOC1S1P78537 153 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 ABCA11PQ4W5N1 156 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 KRTCAP3Q53RY4 240 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 LEMD1Q68G75 181 aa7.64□□□□□ -1.19
SYNE1-211ENST00000413186 CNIH2Q6PI25 160 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms