RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CEACAM19Q7Z692 300 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 BTLAQ7Z6A9 289 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 GABRG1Q8N1C3 465 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 OR8B12Q8NGG6 310 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 OR51A4Q8NGJ6 313 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 OR10AC1Q8NH08 325 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 OR1F12Q8NHA8 337 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 AKR7LQ8NHP1 331 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 NANOS1Q8WY41 292 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 SPTSSAQ969W0 71 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 DACH2Q96NX9 599 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 DERL3Q96Q80 235 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 KCNJ15Q99712 375 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 MED18Q9BUE0 208 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 SLIRPQ9GZT3 109 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 PBOV1Q9GZY1 135 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 OPN3Q9H1Y3 402 aaPredicted RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 PPIL3Q9H2H8 161 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 NOX3Q9HBY0 568 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 PLSCR4Q9NRQ2 329 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 NUFIP1Q9UHK0 495 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 GSTK1Q9Y2Q3 226 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 TIMM10BQ9Y5J6 103 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 PMF1-BGLAPU3KQ54 211 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 DSPP15924 2871 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 PHF3Q92576 2039 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 F5H5K5 113 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 M0R135 149 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 PIN1P1O15428 100 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ARL6IP5O75915 188 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 LYZL6O75951 148 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 CDRT1O95170 752 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 APOC1P02654 83 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 TTRP02766 147 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ISG15P05161 165 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ANXA2P07355 339 aaKnown RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 DBHP09172 617 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ACSM4P0C7M7 580 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 OCM2P0CE71 109 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 SLC2A1P11166 492 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 CD79AP11912 226 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ACHEP22303 614 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 MYL9P24844 172 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 MAPK3P27361 379 aaPredicted RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 SDC2P34741 201 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 RPS19P39019 145 aaKnown RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 MAGEB1P43366 347 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 HTR5AP47898 357 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 SLC6A9P48067 706 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 MTNR1BP49286 362 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 GALK2Q01415 458 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 TGFBR3Q03167 851 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 HGFACQ04756 655 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 MXD1Q05195 221 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 DGUOKQ16854 277 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 GSG1Q2KHT4 349 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 RSPO1Q2MKA7 263 aaPredicted RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 HSD17B12Q53GQ0 312 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 PABPC1L2AQ5JQF8 200 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 TMEM53Q6P2H8 277 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 DRAM2Q6UX65 266 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 UNQ9370/PRO34162Q6UXP9 181 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ZNF704Q6ZNC4 412 aaPredicted RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 DPPA2Q7Z7J5 298 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ELMOD2Q8IZ81 293 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 RDH10Q8IZV5 341 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ZNF433Q8N7K0 673 aaPredicted RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 ZNF283Q8N7M2 679 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ST6GALNAC3Q8NDV1 305 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 C1orf162Q8NEQ5 155 aaPredicted RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 GPR148Q8TDV2 347 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 TSEN15Q8WW01 171 aaKnown RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 SLC7A6Q92536 515 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 PHYHIPQ92561 330 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 THRSPQ92748 146 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 BCL2L2Q92843 193 aaPredicted RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 PPP1R14AQ96A00 147 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 TMEM106AQ96A25 262 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 SLC25A46Q96AG3 418 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 ZNF799Q96GE5 643 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 BOD1Q96IK1 185 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 TSC22D3Q99576 134 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 KCNS3Q9BQ31 491 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 BARHL1Q9BZE3 327 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 RNF121Q9H920 327 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 NOX4Q9NPH5 578 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 BRD7Q9NPI1 651 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 SLC17A5Q9NRA2 495 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 SNTG1Q9NSN8 517 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 SH3BGRL2Q9UJC5 107 aa5.8□□□□□ -1.48
VPS41-204ENST00000413141 PRRC2CQ9Y520 2896 aaKnown RBP5.8□□□□□ -1.48
VPS41-204ENST00000413141 FREM1Q5H8C1 2179 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TRBV5-7A0A0A0MS05 114 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ARPC4-TTLL3A0A0A6YYG9 625 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TRAV1-2A0A0B4J238 106 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 A0A0G2JNJ9 132 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 A0A1W2PPK0 400 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 SMIM30A4D0T7 59 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 C5orf63A6NC05 138 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 H3BSH0 61 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms