RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 SLC25A28Q96A46 364 aa17.02■□□□□ 0.32
LMO2-203ENST00000411482 PNPLA2Q96AD5 504 aa17.02■□□□□ 0.32
LMO2-203ENST00000411482 SFXN2Q96NB2 322 aa17.02■□□□□ 0.32
LMO2-203ENST00000411482 DDX28Q9NUL7 540 aaKnown RBP17.02■□□□□ 0.32
LMO2-203ENST00000411482 CKLFQ9UBR5 152 aa17.02■□□□□ 0.32
LMO2-203ENST00000411482 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.32
LMO2-203ENST00000411482 KCNMB2Q9Y691 235 aa17.02■□□□□ 0.32
LMO2-203ENST00000411482 FAM240BA0A1B0GVZ2 78 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 LOC390937A0A1W2PQ73 354 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 H0YC42 278 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 MSR1P21757 451 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 HLA-DMAP28067 261 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 DGCR2P98153 550 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 DYRK1AQ13627 763 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 TOMM20Q15388 145 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 LINC00303Q3SY05 128 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 WIPI1Q5MNZ9 446 aaPredicted RBP17.01■□□□□ 0.31
LMO2-203ENST00000411482 C1orf100Q5SVJ3 147 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 PCSK4Q6UW60 755 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 OR6N1Q8NGY5 312 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 SYNPRQ8TBG9 265 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 NABP1Q96AH0 204 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 SIGLEC12Q96PQ1 595 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 PBOV1Q9GZY1 135 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 NELFAQ9H3P2 528 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 ZNF275Q9NSD4 429 aaPredicted RBP17.01■□□□□ 0.31
LMO2-203ENST00000411482 RBMX2Q9Y388 322 aaKnown RBP17.01■□□□□ 0.31
LMO2-203ENST00000411482 FLVCR1Q9Y5Y0 555 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 ATRXP46100 2492 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 IGSF10Q6WRI0 2623 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 IGHV3-15A0A0B4J1V0 119 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 A0A1B0GTI1 187 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 HMX3A6NHT5 357 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 GABARAPH6UMI1 98 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 ITGA5P08648 1049 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 BTCP35070 178 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 ENDOGQ14249 297 aaKnown RBP17.01■□□□□ 0.31
LMO2-203ENST00000411482 HYAL4Q2M3T9 481 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 GLT8D1Q68CQ7 371 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 ZNF529Q6P280 563 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 EXTL1Q92935 676 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 ZNF703Q9H7S9 590 aaPredicted RBP17.01■□□□□ 0.31
LMO2-203ENST00000411482 ASH2LQ9UBL3 628 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 CLEC4AQ9UMR7 237 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 CACNG2Q9Y698 323 aa17.01■□□□□ 0.31
LMO2-203ENST00000411482 NCOA6Q14686 2063 aaPredicted RBP17■□□□□ 0.31
LMO2-203ENST00000411482 A0A0B4J293 547 aa17■□□□□ 0.31
LMO2-203ENST00000411482 EIF1AYO14602 144 aaKnown RBP17■□□□□ 0.31
LMO2-203ENST00000411482 WDPCPO95876 746 aa17■□□□□ 0.31
LMO2-203ENST00000411482 ITGB2P05107 769 aa17■□□□□ 0.31
LMO2-203ENST00000411482 CCL1P22362 96 aa17■□□□□ 0.31
LMO2-203ENST00000411482 ITGA3P26006 1051 aa17■□□□□ 0.31
LMO2-203ENST00000411482 GDF1P27539 372 aa17■□□□□ 0.31
LMO2-203ENST00000411482 DDOSTP39656 456 aa17■□□□□ 0.31
LMO2-203ENST00000411482 TPTEP56180 551 aa17■□□□□ 0.31
LMO2-203ENST00000411482 BTG1P62324 171 aa17■□□□□ 0.31
LMO2-203ENST00000411482 GRB2P62993 217 aaKnown RBP17■□□□□ 0.31
LMO2-203ENST00000411482 MRPS34P82930 218 aaKnown RBP17■□□□□ 0.31
LMO2-203ENST00000411482 KLF9Q13886 244 aaPredicted RBP17■□□□□ 0.31
LMO2-203ENST00000411482 OR1C1Q15619 314 aa17■□□□□ 0.31
LMO2-203ENST00000411482 RAB11BQ15907 218 aa17■□□□□ 0.31
LMO2-203ENST00000411482 ANKRD16Q6P6B7 361 aa17■□□□□ 0.31
LMO2-203ENST00000411482 OR13C3Q8NGS6 347 aa17■□□□□ 0.31
LMO2-203ENST00000411482 CREB3L1Q96BA8 519 aa17■□□□□ 0.31
LMO2-203ENST00000411482 ZFP3Q96NJ6 502 aa17■□□□□ 0.31
LMO2-203ENST00000411482 ZNF416Q9BWM5 594 aa17■□□□□ 0.31
LMO2-203ENST00000411482 TAS2R4Q9NYW5 299 aa17■□□□□ 0.31
LMO2-203ENST00000411482 NLKQ9UBE8 527 aa17■□□□□ 0.31
LMO2-203ENST00000411482 POLR1DQ9Y2S0 133 aa17■□□□□ 0.31
LMO2-203ENST00000411482 CHD6Q8TD26 2715 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 PHF3Q92576 2039 aaKnown RBP16.99■□□□□ 0.31
LMO2-203ENST00000411482 P2RY10O00398 339 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 SELENOPP49908 381 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 FAM27BQ5VT28 67 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 PRSS45Q7RTY3 260 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 UBE2J2Q8N2K1 259 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 TOMM5Q8N4H5 51 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 MDS2Q8NDY4 140 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 OR10D3Q8NH80 312 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 FAM3DQ96BQ1 224 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 FOXRED1Q96CU9 486 aaPredicted RBP16.99■□□□□ 0.31
LMO2-203ENST00000411482 B4GALT7Q9UBV7 327 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 LHX6Q9UPM6 363 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 MRPS7Q9Y2R9 242 aaKnown RBP16.99■□□□□ 0.31
LMO2-203ENST00000411482 RHBDD3Q9Y3P4 386 aa16.99■□□□□ 0.31
LMO2-203ENST00000411482 LOC100289279A0A1B0GTE1 492 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 TFECO14948 347 aaPredicted RBP16.98■□□□□ 0.31
LMO2-203ENST00000411482 LDLRAD4O15165 306 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 RER1O15258 196 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 XRCC3O43542 346 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 CXCL13O43927 109 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 CYTIPO60759 359 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 TRAPPC6AO75865 159 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 GLSO94925 669 aaPredicted RBP16.98■□□□□ 0.31
LMO2-203ENST00000411482 CD3GP09693 182 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 POU3F2P20265 443 aaPredicted RBP16.98■□□□□ 0.31
LMO2-203ENST00000411482 CDK2P24941 298 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 GUCA1AP43080 201 aaPredicted RBP16.98■□□□□ 0.31
LMO2-203ENST00000411482 CAPZA1P52907 286 aa16.98■□□□□ 0.31
LMO2-203ENST00000411482 PDSS1Q5T2R2 415 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms