RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 GJC3Q8NFK1 279 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 OR6M1Q8NGM8 313 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 PHF21AQ96BD5 680 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 ZNF703Q9H7S9 590 aaPredicted RBP18.28■□□□□ 0.52
USP39-203ENST00000409470 DIABLOQ9NR28 239 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 MRPL15Q9P015 296 aaKnown RBP18.28■□□□□ 0.52
USP39-203ENST00000409470 A8MV72 311 aaPredicted RBP18.27■□□□□ 0.52
USP39-203ENST00000409470 LINC01387J3KSC0 135 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 XRCC3O43542 346 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 GLSO94925 669 aaPredicted RBP18.27■□□□□ 0.52
USP39-203ENST00000409470 MT-ND4P03905 459 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 PTHLHP12272 177 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 DYRK1AQ13627 763 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 ENDOGQ14249 297 aaKnown RBP18.27■□□□□ 0.52
USP39-203ENST00000409470 ANKRD16Q6P6B7 361 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 NKAIN3Q8N8D7 197 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 OR8B12Q8NGG6 310 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 SLC25A28Q96A46 364 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 NABP1Q96AH0 204 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 RCE1Q9Y256 329 aa18.27■□□□□ 0.52
USP39-203ENST00000409470 ZNF318Q5VUA4 2279 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 TMEM272A0A1B0GTI8 110 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 ZNF716A6NP11 495 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 ACOT7O00154 380 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 CTAG2O75638 210 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 ECDO95905 644 aaPredicted RBP18.27■□□□□ 0.51
USP39-203ENST00000409470 ARSBP15848 533 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 GIFP27352 417 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 CLDN15P56746 228 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 ATAD3CQ5T2N8 411 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 ABHD12BQ7Z5M8 362 aaPredicted RBP18.27■□□□□ 0.51
USP39-203ENST00000409470 OR1J2Q8NGS2 313 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 SLC7A6Q92536 515 aa18.27■□□□□ 0.51
USP39-203ENST00000409470 CPNE4Q96A23 557 aaPredicted RBP18.27■□□□□ 0.51
USP39-203ENST00000409470 ADAT3Q96EY9 351 aaPredicted RBP18.27■□□□□ 0.51
USP39-203ENST00000409470 OTOGLQ3ZCN5 2332 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 FAM166BA8MTA8 275 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 ZNF20P17024 532 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 AP3S2P59780 193 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 TGIF1Q15583 401 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 ATP1A1-AS1Q5TC04 95 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 ABLIM2Q6H8Q1 611 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 FAM57BQ71RH2 274 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 AAED1Q7RTV5 226 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 ZNF845Q96IR2 970 aaPredicted RBP18.26■□□□□ 0.51
USP39-203ENST00000409470 CACNG6Q9BXT2 260 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 ATG5Q9H1Y0 275 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 KLK11Q9UBX7 282 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 SLC5A6Q9Y289 635 aa18.26■□□□□ 0.51
USP39-203ENST00000409470 TRAV6A0A075B6T7 132 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 A0A1B0GTI1 187 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 GGT3PA6NGU5 568 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 LRP3O75074 770 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 TPPPO94811 219 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 HPNP05981 417 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 CD82P27701 267 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 BDKRB2P30411 391 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 BTG1P62324 171 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 PLGLB1Q02325 96 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 ZBTB8BQ8NAP8 495 aaPredicted RBP18.25■□□□□ 0.51
USP39-203ENST00000409470 OR5D14Q8NGL3 314 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 FOXRED1Q96CU9 486 aaPredicted RBP18.25■□□□□ 0.51
USP39-203ENST00000409470 ZNF837Q96EG3 531 aaPredicted RBP18.25■□□□□ 0.51
USP39-203ENST00000409470 ST6GAL2Q96JF0 529 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 TTTY12Q9BZ98 90 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 SLC17A5Q9NRA2 495 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 NUDT15Q9NV35 164 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 NUBP2Q9Y5Y2 271 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 A6NL46 340 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 TCRBP04435 133 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 CELA3AP09093 270 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 CD37P11049 281 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 GFOD2Q3B7J2 385 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 GPR137CQ8N3F9 429 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 GALNT16Q8N428 558 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 OR1M1Q8NGA1 313 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 SORCS2Q96PQ0 1159 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 GPR84Q9NQS5 396 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 COPZ2Q9P299 210 aa18.25■□□□□ 0.51
USP39-203ENST00000409470 RBMX2Q9Y388 322 aaKnown RBP18.25■□□□□ 0.51
USP39-203ENST00000409470 OR5H15A6NDH6 313 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 GSTT2BP0CG30 244 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 NTF4P34130 210 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 MAGEA5P43359 124 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 CCR6P51684 374 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 NKX2-5P52952 324 aaPredicted RBP18.24■□□□□ 0.51
USP39-203ENST00000409470 SRYQ05066 204 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 CBX3Q13185 183 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 FAM71F1Q96KD3 344 aaPredicted RBP18.24■□□□□ 0.51
USP39-203ENST00000409470 CRLF2Q9HC73 371 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 ZNF319Q9P2F9 582 aa18.24■□□□□ 0.51
USP39-203ENST00000409470 TRAV18A0A075B6X5 111 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 ARGFXA6NJG6 315 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 F5H5K5 113 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 DHFRP00374 187 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 RAB3AP20336 220 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 MRPS34P82930 218 aaKnown RBP18.23■□□□□ 0.51
USP39-203ENST00000409470 C1orf100Q5SVJ3 147 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 ZNF813Q6ZN06 617 aa18.23■□□□□ 0.51
USP39-203ENST00000409470 DTX1Q86Y01 620 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms