RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR3A2P47893 321 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 PSG4Q00888 419 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 TMEM244Q5VVB8 128 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 ZNF324BQ6AW86 544 aaPredicted RBP12.31□□□□□ -0.44
GPNMB-203ENST00000409458 ASPHD2Q6ICH7 369 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 STAC2Q6ZMT1 411 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 FAM57BQ71RH2 274 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 PRSS45Q7RTY3 260 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 LRRTM1Q86UE6 522 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 THRSPQ92748 146 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 WNT2BQ93097 391 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 CEP19Q96LK0 163 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 WDFY2Q96P53 400 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 SLC30A2Q9BRI3 323 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 HDHD2Q9H0R4 259 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 WNT5BQ9H1J7 359 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 ZNF319Q9P2F9 582 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 DAPK2Q9UIK4 370 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 N6AMT1Q9Y5N5 214 aa12.31□□□□□ -0.44
GPNMB-203ENST00000409458 CACNA1GO43497 2377 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 C5orf63A6NC05 138 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 OR6C6A6NF89 314 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 NOTOA8MTQ0 251 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 E9PLN8 166 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 LMX1BO60663 402 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 ANXA2P07355 339 aaKnown RBP12.3□□□□□ -0.44
GPNMB-203ENST00000409458 ITGA5P08648 1049 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
GPNMB-203ENST00000409458 ATF1P18846 271 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 CRYGSP22914 178 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 TNFSF8P32971 234 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 ETV6P41212 452 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 PCBD1P61457 104 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 NSUN5P2Q63ZY6 315 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 TFAP2EQ6VUC0 442 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 CROCCP3Q8IVE0 287 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 OR13C3Q8NGS6 347 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 TCF7L1Q9HCS4 588 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 TIMM10BQ9Y5J6 103 aa12.3□□□□□ -0.44
GPNMB-203ENST00000409458 A0A1B0GTI1 187 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ZNF503-AS2A6NEH8 195 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 M0R135 149 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 PDCD5O14737 125 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 IL18BPO95998 194 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 EPXP11678 715 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 IGF2RP11717 2491 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ADRA2CP18825 462 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 KRTAP27-1Q3LI81 207 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SFRP5Q5T4F7 317 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 DDI2Q5TDH0 399 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 FAM214BQ7L5A3 538 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ABHD12BQ7Z5M8 362 aaPredicted RBP12.29□□□□□ -0.44
GPNMB-203ENST00000409458 PARP16Q8N5Y8 322 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 OR1F12Q8NHA8 337 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 OR51E1Q8TCB6 317 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ZNF799Q96GE5 643 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SLITRK2Q9H156 845 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SLC17A5Q9NRA2 495 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 TAS2R4Q9NYW5 299 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 A0A0B4J203 849 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SYT7O43581 403 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 HPGDSO60760 199 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 MAS1P04201 325 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 TPOP07202 933 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ABOP16442 354 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 MPGP29372 298 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 KIR2DL2P43627 348 aaPredicted RBP12.29□□□□□ -0.44
GPNMB-203ENST00000409458 HTR5AP47898 357 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SLC6A9P48067 706 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 TDGF1P3P51864 188 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 HGFACQ04756 655 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 RTL6Q6ICC9 239 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 VWA1Q6PCB0 445 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 UNQ6494/PRO21346Q6UXR6 183 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 CD163Q86VB7 1156 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SNX29P2Q8IUI4 249 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 CISD2Q8N5K1 135 aaKnown RBP12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ZNF433Q8N7K0 673 aaPredicted RBP12.29□□□□□ -0.44
GPNMB-203ENST00000409458 CNEP1R1Q8N9A8 125 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 DNAAF1Q8NEP3 725 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 OR1K1Q8NGR3 316 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ACOT12Q8WYK0 555 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SPTSSAQ969W0 71 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
GPNMB-203ENST00000409458 PGAM5Q96HS1 289 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 SOX7Q9BT81 388 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 ZCCHC4Q9H5U6 513 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 V9GYH0 126 aa12.29□□□□□ -0.44
GPNMB-203ENST00000409458 PIEZO1Q92508 2521 aa12.28□□□□□ -0.44
GPNMB-203ENST00000409458 ARPC4-TTLL3A0A0A6YYG9 625 aa12.28□□□□□ -0.44
GPNMB-203ENST00000409458 MBD3L4A6NDZ8 208 aaPredicted RBP12.28□□□□□ -0.44
GPNMB-203ENST00000409458 MBD3L3A6NE82 208 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms