RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 EPXP11678 715 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 NR4A2P43354 598 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 PITPNBP48739 271 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 INPP1P49441 399 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 BIDP55957 195 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 TPTEP56180 551 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 RAP1BP61224 184 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 LCN6P62502 163 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 RAP1AP62834 184 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 CD300CQ08708 224 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 SLC25A35Q3KQZ1 300 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 CEP78Q5JTW2 689 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 LIPNQ5VXI9 398 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 FAM205BPQ63HN1 556 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 OR4M1Q8NGD0 313 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 TMEM45BQ96B21 275 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 CCDC120Q96HB5 630 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 PDCD1LG2Q9BQ51 273 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 RBFOX1Q9NWB1 397 aaKnown RBP11.82□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF629Q9UEG4 869 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-204ENST00000409441 ERRFI1Q9UJM3 462 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-204ENST00000409441 KLHDC2Q9Y2U9 406 aa11.82□□□□□ -0.52
LIMS1-204ENST00000409441 TVP23AA6NH52 213 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 CRABP1P29762 137 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 OPRM1P35372 400 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 SELENOPP49908 381 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 DAP3P51398 398 aaKnown RBP11.81□□□□□ -0.52
LIMS1-204ENST00000409441 NANOS3P60323 173 aaKnown RBP11.81□□□□□ -0.52
LIMS1-204ENST00000409441 ADORA2A-AS1P86434 159 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 MTFR2Q6P444 385 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 FDX2Q6P4F2 183 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 VWA1Q6PCB0 445 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 WDFY1Q8IWB7 410 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 DUSP18Q8NEJ0 188 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 OR6X1Q8NH79 312 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 OTOSQ8NHW6 89 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 MAP6Q96JE9 813 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 DERL3Q96Q80 235 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 SFXN3Q9BWM7 321 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 NOX4Q9NPH5 578 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 B3GAT2Q9NPZ5 323 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 PLSCR4Q9NRQ2 329 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 SPATA2Q9UM82 520 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 SLC5A6Q9Y289 635 aa11.81□□□□□ -0.52
LIMS1-204ENST00000409441 MYO7BQ6PIF6 2116 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 IGLV1-36A0A0B4J1U3 117 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 A0A0G2JMP0 313 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 TRBV5-5A0A0J9YX44 114 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 A0A0X1KG70 313 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 LINC00854A0A1B0GVQ3 168 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 SLC22A23A1A5C7 686 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 TMEM212A6NML5 194 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 LYRM1O43325 122 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 ZFPL1O95159 310 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 IL18BPO95998 194 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 ATF1P18846 271 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 SRMP19623 302 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 BMP5P22003 454 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 PITPNAQ00169 270 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 CAMK2DQ13557 499 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 MELKQ14680 651 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 Q499Y3 187 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.8□□□□□ -0.52
LIMS1-204ENST00000409441 LIX1LQ8IVB5 337 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF100Q8IYN0 542 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 OR4M2Q8NGB6 313 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 OR5AK2Q8NH90 309 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 ASB10Q8WXI3 467 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 APH1AQ96BI3 265 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 SLC25A44Q96H78 314 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-204ENST00000409441 OR2M2Q96R28 347 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 WACQ9BTA9 647 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 SLITRK2Q9H156 845 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 RNF121Q9H920 327 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 IKZF2Q9UKS7 526 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 RCE1Q9Y256 329 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
LIMS1-204ENST00000409441 MEIOCA2RUB1 952 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 PIN1P1O15428 100 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 UBL3O95164 117 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 CGAP01215 116 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 RAF1P04049 648 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 PLA2G2AP14555 144 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 KIR2DL3P43628 341 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 CBX3Q13185 183 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 CARD17Q5XLA6 110 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 SLC18B1Q6NT16 456 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 DPY19L4Q7Z388 723 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 OR2G2Q8NGZ5 317 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 RGP1Q92546 391 aaPredicted RBP11.79□□□□□ -0.52
LIMS1-204ENST00000409441 NSMAFQ92636 917 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 RFT1Q96AA3 541 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 OR8B4Q96RC9 309 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms