RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 RD3LP0DJH9 198 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 LYL1P12980 280 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TYMPP19971 482 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TBXA2RP21731 343 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 CD1CP29017 333 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 F2RL1P55085 397 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TAS2R19P59542 299 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR2B8PP59922 312 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 MAXP61244 160 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TNFRSF9Q07011 255 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 SLC10A7Q0GE19 358 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 CNTN1Q12860 1018 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TSPAN31Q12999 210 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ZNF177Q13360 481 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR8G1Q15617 311 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 HAGHQ16775 308 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ZNF791Q3KP31 576 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 KRBOX4Q5JUW0 171 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TMEM69Q5SWH9 247 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 NKAIN2Q5VXU1 208 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ZDHHC20Q5W0Z9 365 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 MBOAT1Q6ZNC8 495 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 MRGPRGQ86SM5 289 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 NR2C2APQ86WQ0 139 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 NUDT13Q86X67 352 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 IQCF1Q8N6M8 205 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ZNF283Q8N7M2 679 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 PNLDC1Q8NA58 520 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 UBAC2Q8NBM4 344 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ACBD4Q8NC06 268 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR7G2Q8NG99 324 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR4K5Q8NGD3 323 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR5M8Q8NGP6 311 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR9A4Q8NGU2 314 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR52I2Q8NH67 350 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 M1APQ8TC57 530 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 PAQR8Q8TEZ7 354 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 APOBEC4Q8WW27 367 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 PPCDCQ96CD2 204 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ECHDC3Q96DC8 303 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 RRNAD1Q96FB5 475 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 HMCESQ96FZ2 354 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 KLHL5Q96PQ7 755 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR1F2PQ96R84 312 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 CLCC1Q96S66 551 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 MYADMQ96S97 322 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 SLC25A21Q9BQT8 299 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 SULT4A1Q9BR01 284 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ACBD6Q9BR61 282 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 PIGQQ9BRB3 760 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ADAT1Q9BUB4 502 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 POTEKPQ9BYX7 375 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ATG5Q9H1Y0 275 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OPN3Q9H1Y3 402 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 KLK15Q9H2R5 256 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 RGCCQ9H4X1 137 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 SIRT7Q9NRC8 400 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 MRPL17Q9NRX2 175 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 SLC25A13Q9UJS0 675 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 PRG3Q9Y2Y8 225 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 GOLT1BQ9Y3E0 138 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 PCYT1BQ9Y5K3 369 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 NYNRINQ9P2P1 1898 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 SPENQ96T58 3664 aaKnown RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 IDSB3KWA1 339 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TRDCB7Z8K6 153 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SLC16A5O15375 505 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TOX3O15405 576 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 GPRIN2O60269 458 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 C22orf31O95567 290 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CD14P08571 375 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ANXA4P09525 319 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 RFPL3SP0C7P2 107 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 AKAIN1P0CW23 69 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ALPPL2P10696 532 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ATF1P18846 271 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MMP11P24347 488 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 NFYBP25208 207 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 LMO2P25791 158 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PPP2R1BP30154 601 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 LIM2P55344 173 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ACTBP60709 375 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ST8SIA6P61647 398 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ACTG1P63261 375 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 DLK1P80370 383 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CYCSP99999 105 aaKnown RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 TWF1Q12792 350 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SKP2Q13309 424 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 NAE1Q13564 534 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MELKQ14680 651 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TEAD2Q15562 447 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ZNHIT3Q15649 155 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 MLF2Q15773 248 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 C18orf21Q32NC0 220 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms