RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MFSD6LQ8IWD5 586 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 RDH10Q8IZV5 341 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 ARHGAP18Q8N392 663 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 TMEM252Q8N6L7 170 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR10H4Q8NGA5 316 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR10G3Q8NGC4 313 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 FGF11Q92914 225 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 GLT1D1Q96MS3 346 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 OXGR1Q96P68 337 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 PPP1R2P1Q96PQ5 205 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 KCNA7Q96RP8 456 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 MBOAT4Q96T53 435 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 RBBP8Q99708 897 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 SH3GL1Q99961 368 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 P2RY13Q9BPV8 354 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 TBL1YQ9BQ87 522 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 SIKE1Q9BRV8 207 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 NICN1Q9BSH3 213 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 FBXO44Q9H4M3 255 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 SH2D2AQ9NP31 389 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 IL26Q9NPH9 171 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 FBXO6Q9NRD1 293 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 CHRAC1Q9NRG0 131 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 C20orf96Q9NUD7 363 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 RBM22Q9NW64 420 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 MARCH5Q9NX47 278 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 VNN3Q9NY84 501 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 TMEM216Q9P0N5 145 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF107Q9UII5 783 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 NEU3Q9UQ49 428 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 ASF1AQ9Y294 204 aa3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 MYH9P35579 1960 aaKnown RBP3.54□□□□□ -1.84
HMGB3P18-201ENST00000406327 HCFC1P51610 2035 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 IGLV3-10A0A075B6K4 115 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 FAM92AA1XBS5 289 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 DLGAP1O14490 977 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 GYG2O15488 501 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 MBTPS2O43462 519 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 CRLF1O75462 422 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 IGHV3-48P01763 117 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SERPINA6P08185 405 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 FGF4P08620 206 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 RALBP11234 206 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ABOP16442 354 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ATP6V1B2P21281 511 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR1G1P47890 313 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SERPINB8P50452 374 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 CCNG1P51959 295 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 AQP5P55064 265 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 RPL10AP62906 217 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 MRPS22P82650 360 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 MERTKQ12866 999 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLC25A30Q5SVS4 291 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SDHAF4Q5VUM1 108 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 RSBN1Q5VWQ0 802 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 PDPK2PQ6A1A2 396 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZCCHC23Q6ZST2 131 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLC25A48Q6ZT89 311 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 EIF3MQ7L2H7 374 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 CMC1Q7Z7K0 106 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 TMEM179BQ7Z7N9 219 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 MYPOPQ86VE0 399 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 P2RY8Q86VZ1 359 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 HPS6Q86YV9 775 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 C10orf107Q8IVU9 208 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 LYG1Q8N1E2 194 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 UMODL1-AS1Q8N2C9 162 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 GTPBP8Q8N3Z3 284 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ATPAF2Q8N5M1 289 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 BBS1Q8NFJ9 593 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 B3GNT7Q8NFL0 401 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 CHCHD10Q8WYQ3 142 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 B3GALT6Q96L58 329 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 RILPQ96NA2 401 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SERPINB11Q96P15 392 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 SORT1Q99523 831 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 GPR22Q99680 433 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 C20orf24Q9BUV8 137 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZYG11BQ9C0D3 744 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 POLR2J2Q9GZM3 115 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ACTR6Q9GZN1 396 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 FAM96AQ9H5X1 160 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 MRM3Q9HC36 420 aaKnown RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 GLRX2Q9NS18 164 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 EXD2Q9NVH0 621 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 TAS2R1Q9NYW7 299 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 B4GALT7Q9UBV7 327 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 MARCOQ9UEW3 520 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 PRG3Q9Y2Y8 225 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 UGT2A1Q9Y4X1 527 aa3.53□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNFX1Q9P2E3 1918 aaKnown RBP3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 PLXNA1Q9UIW2 1896 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZSWIM8A7E2V4 1837 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 PLXNB2O15031 1838 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMEM114B3SHH9 223 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SPECC1L-ADORA2AF8WAN1 911 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 GOLGA8TH3BQL2 631 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 KLHL2O95198 593 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 VAPBO95292 243 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms