RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ZNF154Q13106 437 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 BAMBIQ13145 260 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 KCNMB1Q16558 191 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 MICAQ29983 383 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 TMEM155Q4W5P6 130 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 TMEM255AQ5JRV8 349 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 ZNF362Q5T0B9 420 aaPredicted RBP10.41□□□□□ -0.74
PRAME-204ENST00000403441 RPL13AP3Q6NVV1 102 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 CD300LDQ6UXZ3 194 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 RASSF6Q6ZTQ3 369 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 NPEPL1Q8NDH3 523 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 DCLRE1CQ96SD1 692 aaKnown RBP10.41□□□□□ -0.74
PRAME-204ENST00000403441 DDOQ99489 341 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 CHID1Q9BWS9 393 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 WNT5BQ9H1J7 359 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 SYT4Q9H2B2 425 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 TMEM106BQ9NUM4 274 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 ZNF69Q9UC07 566 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 OR5V1Q9UGF6 321 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 IL20RAQ9UHF4 553 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 TIMM10BQ9Y5J6 103 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 IER3IP1Q9Y5U9 82 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 CDH10Q9Y6N8 788 aa10.41□□□□□ -0.74
PRAME-204ENST00000403441 IGLV1-36A0A0B4J1U3 117 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 C12orf71A8MTZ7 269 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 DCTN6O00399 190 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 ATP5HO75947 161 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 PPP1R3DO95685 299 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 ABHD16AO95870 558 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 NGFP01138 241 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 GASTP01350 101 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 RNASE1P07998 156 aaKnown RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 ZNF12P17014 697 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 MSR1P21757 451 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 LAP3P28838 519 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 BTG1P62324 171 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 HIST1H3AP68431 136 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 FLOT2Q14254 428 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 ESCO2Q56NI9 601 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 HIST2H3PS2Q5TEC6 136 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 TREML4Q6UXN2 200 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 HIST2H3AQ71DI3 136 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 ZBTB46Q86UZ6 589 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 OR2Z1Q8NG97 314 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 OR8D4Q8NGM9 314 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 SLCO4A1Q96BD0 722 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 C4orf45Q96LM5 186 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 SAMD8Q96LT4 415 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 LRGUKQ96M69 825 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 MS4A7Q9GZW8 240 aaPredicted RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 MMADHCQ9H3L0 296 aaPredicted RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 REEP1Q9H902 201 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 UNKLQ9H9P5 680 aaKnown RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 MMP26Q9NRE1 261 aa10.4□□□□□ -0.74
PRAME-204ENST00000403441 NDRG4Q9ULP0 352 aaKnown RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
PRAME-204ENST00000403441 ARHGAP32A7KAX9 2087 aa10.4□□□□□ -0.75
PRAME-204ENST00000403441 A0A1W2PPL8 197 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 POM121CA8CG34 1229 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 CLDN34H7C241 214 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 SOCS2O14508 198 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 SURF4O15260 269 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 CCNB2O95067 398 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 COX5BP10606 129 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 HIST1H1CP16403 213 aaKnown RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 TUBG1P23258 451 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 MTNR1AP48039 350 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 SLC6A9P48067 706 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 RASSF2P50749 326 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 LSM6P62312 80 aaKnown RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 PPP1R8Q12972 351 aaKnown RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 CDK5R2Q13319 367 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 KLF17Q5JT82 389 aaPredicted RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 ZNF774Q6NX45 483 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 TMEM179BQ7Z7N9 219 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 GLB1L2Q8IW92 636 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 ZNF283Q8N7M2 679 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 AQP11Q8NBQ7 271 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 DUS3LQ96G46 650 aaKnown RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 ERMAPQ96PL5 475 aaPredicted RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 C1QTNF5Q9BXJ0 243 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 NUAK2Q9H093 628 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 EGLN3Q9H6Z9 239 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 TUBG2Q9NRH3 451 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 KLHL21Q9UJP4 597 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 PPP1R3CQ9UQK1 317 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 SAMHD1Q9Y3Z3 626 aaKnown RBP10.39□□□□□ -0.75
PRAME-204ENST00000403441 INSIG2Q9Y5U4 225 aa10.39□□□□□ -0.75
PRAME-204ENST00000403441 OR6C68A6NDL8 312 aa10.38□□□□□ -0.75
PRAME-204ENST00000403441 A8MXK9 166 aa10.38□□□□□ -0.75
PRAME-204ENST00000403441 TRAPPC2LH3BP13 241 aa10.38□□□□□ -0.75
PRAME-204ENST00000403441 KHDRBS3O75525 346 aaKnown RBP10.38□□□□□ -0.75
PRAME-204ENST00000403441 CST1P01037 141 aa10.38□□□□□ -0.75
PRAME-204ENST00000403441 CRABP1P29762 137 aa10.38□□□□□ -0.75
PRAME-204ENST00000403441 MDH2P40926 338 aaKnown RBP10.38□□□□□ -0.75
PRAME-204ENST00000403441 SEC61A1P61619 476 aaKnown RBP10.38□□□□□ -0.75
PRAME-204ENST00000403441 COX10Q12887 443 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms