RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PARP8Q8N3A8 854 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 BBS1Q8NFJ9 593 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 DNAJC9Q8WXX5 260 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RDH5Q92781 318 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZMYND19Q96E35 227 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 DCLRE1CQ96SD1 692 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TVP23BQ9NYZ1 205 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PURGQ9UJV8 347 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OAZ3Q9UMX2 235 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SONP18583 2426 aaKnown RBP11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 LRP5LA4QPB2 252 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 INAFM1C9JVW0 142 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 GLCEO94923 617 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 MT-ND5P03915 603 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 GSTT1P30711 240 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RGS6P49758 472 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ECH1Q13011 328 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HNRNPA0Q13151 305 aaKnown RBP11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TRIP10Q15642 601 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SNAPC1Q16533 368 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PCGF3Q3KNV8 242 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TEX30Q5JUR7 227 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 COLCA1Q6ZS62 124 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SPATC1Q76KD6 591 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OR5AS1Q8N127 324 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZNF540Q8NDQ6 660 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OR6N2Q8NGY6 317 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ST7LQ8TDW4 575 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HAVCR1Q96D42 359 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SLAMF6Q96DU3 332 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CENPNQ96H22 339 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PLEKHA8Q96JA3 519 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 INTS14Q96SY0 518 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 C1QTNF5Q9BXJ0 243 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZNF275Q9NSD4 429 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CENPMQ9NSP4 180 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 DECR2Q9NUI1 292 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 NKIRAS2Q9NYR9 191 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CACNG2Q9Y698 323 aa11.99□□□□□ -0.49
HLA-DQB1-202ENST00000399079 C5orf63A6NC05 138 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SAC3D1A6NKF1 404 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 H3BNX3 289 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 J3QW42 95 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 M0R129 80 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 M0R135 149 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 LILRA1O75019 489 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 LCATP04180 440 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 KITLGP21583 273 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ACHEP22303 614 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TUBG1P23258 451 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RBMXP38159 391 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 BLVRAP53004 296 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ESRRGP62508 458 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OR2T2Q6IF00 324 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 Q6ZR03 302 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TIGD4Q8IY51 512 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZNF799Q96GE5 643 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 COG8Q96MW5 612 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 AMELYQ99218 206 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CIB1Q99828 191 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PKP2Q99959 881 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 COPS4Q9BT78 406 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 GABARAPL1Q9H0R8 117 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 MARCH7Q9H992 704 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CHODLQ9H9P2 273 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SAP30LQ9HAJ7 183 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TUBG2Q9NRH3 451 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 DDX28Q9NUL7 540 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TREM2Q9NZC2 230 aa11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TMEFF2Q9UIK5 374 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CD5LO43866 347 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SELENOFO60613 162 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RP2O75695 350 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RAC2P15153 192 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SLC2A5P22732 501 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 IL2RGP31785 369 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OTX1P32242 354 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 POLR2IP36954 125 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 LIPAP38571 399 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SLC6A9P48067 706 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PRKXP51817 358 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TPTEP56180 551 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 EIF2B1Q14232 305 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SNAI3Q3KNW1 292 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 FBXW12Q6X9E4 464 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 USP51Q70EK9 711 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CXXC5Q7LFL8 322 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 BCDIN3DQ7Z5W3 292 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 BHLHE23Q8NDY6 225 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SPTSSAQ969W0 71 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ABHD6Q9BV23 337 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms