RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SF3B6Q9Y3B4 125 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 ARPC4-TTLL3A0A0A6YYG9 625 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 PLPP2O43688 288 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 PNPP00491 289 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 CD79AP11912 226 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 PSMB1P20618 241 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 CRYGSP22914 178 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 OTX1P32242 354 aaPredicted RBP14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 ARR3P36575 388 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 MFGE8Q08431 387 aaPredicted RBP14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 GPR50Q13585 617 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 KRTAP27-1Q3LI81 207 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 PABPC1L2AQ5JQF8 200 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 TMEM53Q6P2H8 277 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 CCDC36Q8IYA8 594 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 C17orf78Q8N4C9 275 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 WDR31Q8NA23 367 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 OR2G2Q8NGZ5 317 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 OR1F12Q8NHA8 337 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 NANOS1Q8WY41 292 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 ZNF75AQ96N20 296 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 KCNJ15Q99712 375 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 COQ7Q99807 217 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 NIPAL2Q9H841 368 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 RNF121Q9H920 327 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 SLC17A5Q9NRA2 495 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 CEPT1Q9Y6K0 416 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 R4GMQ9 66 aa14.75□□□□□ -0.05
TSPAN4-205ENST00000397406 PDZD2O15018 2839 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 DCHS2Q6V1P9 2916 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 SMIM31A0A1B0GVY4 71 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 H3BSA7 217 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 CD1AP06126 327 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 HSD11B1P28845 292 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 MMP16P51512 607 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 PSMA6P60900 246 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 RAB1AP62820 205 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 ECH1Q13011 328 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 ALKBH1Q13686 389 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 TAF13Q15543 124 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 GPR107Q5VW38 600 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 CLVS1Q8IUQ0 354 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 PRSS35Q8N3Z0 413 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 CPEB3Q8NE35 698 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 SMIM19Q96E16 107 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 PGLYRP3Q96LB9 341 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 C4orf45Q96LM5 186 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 NAA50Q9GZZ1 169 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 FAM206AQ9NX38 181 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 ELOVL5Q9NYP7 299 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 FRRS1LQ9P0K9 344 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 ATPIF1Q9UII2 106 aa14.74□□□□□ -0.05
TSPAN4-205ENST00000397406 RTTNQ86VV8 2226 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 TRBV2A0A0J9YWF9 115 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 OR5H1A6NKK0 313 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 CLDN14O95500 239 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 DBHP09172 617 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 COX5BP10606 129 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 GABRA5P31644 462 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 KIR3DL2P43630 455 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 HTR5AP47898 357 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 CCR9P51686 369 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 UBE2NP61088 152 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 RPS25P62851 125 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 GSG1Q2KHT4 349 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 ZNF829Q3KNS6 432 aaPredicted RBP14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 WDR38Q5JTN6 314 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 FOXB2Q5VYV0 432 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 ARL9Q6T311 187 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 SLC16A12Q6ZSM3 486 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 MDP1Q86V88 176 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 CATSPERDQ86XM0 798 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 ANKRD13BQ86YJ7 626 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 IL17RDQ8NFM7 739 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 SLC7A6Q92536 515 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 HDHD5Q9BXW7 423 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 G6PC2Q9NQR9 355 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 NDUFA13Q9P0J0 144 aa14.73□□□□□ -0.05
TSPAN4-205ENST00000397406 ABCA12Q86UK0 2595 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 TMEM269A0A1B0GVZ9 245 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 A0A1W2PR80 420 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 OR4C45A6NMZ5 311 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 CD53P19397 219 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 GADD45AP24522 165 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 CHRNB4P30926 498 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 CX3CR1P49238 355 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 GDI2P50395 445 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 PRKXP51817 358 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 SLC3A1Q07837 685 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 FAM27E3Q08E93 113 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 PRSS45Q7RTY3 260 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 P2RY8Q86VZ1 359 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 ZNF584Q8IVC4 421 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 ALDH16A1Q8IZ83 802 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 DOK1Q99704 481 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 OBP2BQ9NPH6 170 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 ENPP5Q9UJA9 477 aa14.72□□□□□ -0.05
TSPAN4-205ENST00000397406 F5H5K5 113 aa14.71□□□□□ -0.05
TSPAN4-205ENST00000397406 LOC110117498-PIK3R3F6TDL0 507 aa14.71□□□□□ -0.05
TSPAN4-205ENST00000397406 M0R135 149 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms