RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 E2F6O75461 281 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 ANXA8P13928 327 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 CPT2P23786 658 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 IGFBP5P24593 272 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 GRK5P34947 590 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 TNFAIP6P98066 277 aaPredicted RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 MEP1BQ16820 701 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 KRTAP27-1Q3LI81 207 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 FAM120AOSQ5T036 256 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 ZNF362Q5T0B9 420 aaPredicted RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 RHOUQ7L0Q8 258 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 SPATA24Q86W54 205 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 SLC37A3Q8NCC5 494 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 OR13G1Q8NGZ3 307 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 NRBF2Q96F24 287 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 FEVQ99581 238 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 RBM4Q9BWF3 364 aaKnown RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 PLA2G12AQ9BZM1 189 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 OPA3Q9H6K4 179 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 SP140LQ9H930 580 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 CMC2Q9NRP2 79 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 DDX28Q9NUL7 540 aaKnown RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 DNAJB9Q9UBS3 223 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 TMEFF2Q9UIK5 374 aaPredicted RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 TCRBV3S1A0A5B6 114 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 H3BN98 237 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 APOC1P02654 83 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 MSMBP08118 114 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 SLC15A1P46059 708 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 CCNIQ14094 377 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 PCK2Q16822 640 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 ACSM5Q6NUN0 579 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 CORO6Q6QEF8 472 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 CFAP77Q6ZQR2 320 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.83□□□□□ -0.52
SEC13-204ENST00000397099 CYB561A3Q8NBI2 242 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
SEC13-204ENST00000397099 OR8G5Q8NG78 346 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 OR2Z1Q8NG97 314 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 OR8D4Q8NGM9 314 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 SLC7A6Q92536 515 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 CCL17Q92583 94 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 SLC7A6OSQ96CW6 309 aaPredicted RBP11.83□□□□□ -0.52
SEC13-204ENST00000397099 NMNAT2Q9BZQ4 307 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 SLC22A4Q9H015 551 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 ZNF665Q9H7R5 613 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 MSL2Q9HCI7 577 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 MRPL22Q9NWU5 206 aaKnown RBP11.83□□□□□ -0.52
SEC13-204ENST00000397099 POMPQ9Y244 141 aa11.83□□□□□ -0.52
SEC13-204ENST00000397099 F5H5K5 113 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 DEAF1O75398 565 aaPredicted RBP11.82□□□□□ -0.52
SEC13-204ENST00000397099 GPANK1O95872 356 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 HMGN1P05114 100 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 DBHP09172 617 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 GATA3P23771 443 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 IL2RGP31785 369 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 SRP9P49458 86 aaKnown RBP11.82□□□□□ -0.52
SEC13-204ENST00000397099 ENTPD1P49961 510 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 LMO4P61968 165 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 PPP1R8Q12972 351 aaKnown RBP11.82□□□□□ -0.52
SEC13-204ENST00000397099 BNIP1Q12981 228 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 CRMP1Q14194 572 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 CR1LQ2VPA4 569 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 DRAM2Q6UX65 266 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 PHC2Q8IXK0 858 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 TMEM186Q96B77 213 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 NIPSNAP1Q9BPW8 284 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 FN3KQ9H479 309 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 TOR3AQ9H497 397 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 PNRC2Q9NPJ4 139 aaKnown RBP11.82□□□□□ -0.52
SEC13-204ENST00000397099 VNN3Q9NY84 501 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 PDP1Q9P0J1 537 aaPredicted RBP11.82□□□□□ -0.52
SEC13-204ENST00000397099 PPP1R3CQ9UQK1 317 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 DYSFO75923 2080 aa11.82□□□□□ -0.52
SEC13-204ENST00000397099 A0A1B0GWJ7 208 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 IQCF6A8MYZ5 107 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 M0R135 149 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 GSC2O15499 205 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 FKBP6O75344 327 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 SOX14O95416 240 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 FSTL3O95633 263 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 LCATP04180 440 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 OSMP13725 252 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 SPI1P17947 270 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 OTX1P32242 354 aaPredicted RBP11.81□□□□□ -0.52
SEC13-204ENST00000397099 PYCR1P32322 319 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
SEC13-204ENST00000397099 CBX1P83916 185 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 MVKQ03426 396 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 RSPO1Q2MKA7 263 aaPredicted RBP11.81□□□□□ -0.52
SEC13-204ENST00000397099 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 PGAP1Q75T13 922 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 LINC00346Q8IVM7 164 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 SPICQ8N5J4 248 aa11.81□□□□□ -0.52
SEC13-204ENST00000397099 ZNF283Q8N7M2 679 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms