RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 UGT2B10P36537 528 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 SLC6A9P48067 706 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 TUBA1BP68363 451 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 TUBA1AQ71U36 451 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 PKD1L2Q7Z442 2459 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 CEACAM19Q7Z692 300 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 PBOV1Q9GZY1 135 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 N6AMT1Q9Y5N5 214 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF503-AS2A6NEH8 195 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 OR6C6A6NF89 314 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 E9PLN8 166 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 SC5DO75845 299 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 ANXA2P07355 339 aaKnown RBP17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 SLC2A1P11166 492 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 RAB1AP62820 205 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 P2RY6Q15077 328 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 GABRA6Q16445 453 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 TMEM211Q6ICI0 200 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 NCCRP1Q6ZVX7 275 aaPredicted RBP17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 CXorf67Q86X51 503 aaPredicted RBP17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 RDH10Q8IZV5 341 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 C1orf162Q8NEQ5 155 aaPredicted RBP17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 RGP1Q92546 391 aaPredicted RBP17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 VKORC1Q9BQB6 163 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 MAP1BP46821 2468 aaKnown RBP17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 ITPR1Q14643 2758 aa17.82■□□□□ 0.44
VCPKMT-202ENST00000395860 M0R135 149 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 DVL2O14641 736 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 DBHP09172 617 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 BMP5P22003 454 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 CRYGSP22914 178 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 OTX1P32242 354 aaPredicted RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 UBE2NP61088 152 aaKnown RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 TSC22D1Q15714 1073 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 GSG1Q2KHT4 349 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 PAMR1Q6UXH9 720 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF704Q6ZNC4 412 aaPredicted RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 CCDC36Q8IYA8 594 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF799Q96GE5 643 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 OR14A2Q96R54 314 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 PIGMQ9H3S5 423 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 NUFIP1Q9UHK0 495 aaKnown RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ACACBO00763 2458 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 GATBO75879 557 aaKnown RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 HOXC12P31275 282 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 CA7P43166 264 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 TPTEP56180 551 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 RSPO1Q2MKA7 263 aaPredicted RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ZMAT1Q5H9K5 638 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 FAM57BQ71RH2 274 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 LUZP2Q86TE4 346 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ELMOD2Q8IZ81 293 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 CPEB3Q8NE35 698 aaKnown RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 GPR148Q8TDV2 347 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 NOX3Q9HBY0 568 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 SLC24A3Q9HC58 644 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF629Q9UEG4 869 aaPredicted RBP17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 MEMO1Q9Y316 297 aa17.81■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF879B4DU55 563 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 H3BSH0 61 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 MSTNO14793 375 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 TTRP02766 147 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 OCM2P0CE71 109 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 UBCP0CG48 685 aaKnown RBP17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 PLP2Q04941 152 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 Q499Y3 187 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 SFRP5Q5T4F7 317 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 TMEM244Q5VVB8 128 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF474Q6S9Z5 364 aaPredicted RBP17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 DRAM2Q6UX65 266 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 NAA40Q86UY6 237 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 DYNC2LI1Q8TCX1 351 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 TSEN15Q8WW01 171 aaKnown RBP17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 RND1Q92730 232 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 DMRTA2Q96SC8 542 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 B3GNT2Q9NY97 397 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 ATPIF1Q9UII2 106 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 OSGIN2Q9Y236 505 aa17.8■□□□□ 0.44
VCPKMT-202ENST00000395860 ACOD1A6NK06 481 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 CDRT1O95170 752 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 ISG15P05161 165 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 HOXB1P14653 301 aaPredicted RBP17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 CALRP27797 417 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 FAM27D1Q5T7N8 215 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 UNQ9370/PRO34162Q6UXP9 181 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 OR8B12Q8NGG6 310 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 OR10AC1Q8NH08 325 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 PGAM5Q96HS1 289 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 BOD1Q96IK1 185 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 SLC17A5Q9NRA2 495 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 TRBV5-5A0A0J9YX44 114 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 IQCMA0A1B0GVH7 501 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 A0A1W2PPK0 400 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 EEF1E1-BLOC1S5C9J1V9 151 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 P2RY10O00398 339 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 EEF1E1O43324 174 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 COX5BP10606 129 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 ACHEP22303 614 aa17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 MAPK3P27361 379 aaPredicted RBP17.79■□□□□ 0.44
VCPKMT-202ENST00000395860 APEX1P27695 318 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms