RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 TAS2R1Q9NYW7 299 aa7.45□□□□□ -1.22
ATG4A-205ENST00000394892 IL20Q9NYY1 176 aa7.45□□□□□ -1.22
ATG4A-205ENST00000394892 ATPIF1Q9UII2 106 aa7.45□□□□□ -1.22
ATG4A-205ENST00000394892 ZDHHC8Q9ULC8 765 aa7.45□□□□□ -1.22
ATG4A-205ENST00000394892 CDH10Q9Y6N8 788 aa7.45□□□□□ -1.22
ATG4A-205ENST00000394892 TENM1Q9UKZ4 2725 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 PLSCR5A0PG75 271 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 F5H0A9 414 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 TMEM178BH3BS89 294 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 TRIM77I1YAP6 450 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 TNFRSF11BO00300 401 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 IDH3BO43837 385 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 GMNNO75496 209 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 DCTN3O75935 186 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF205O95201 554 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 SBK2P0C263 348 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 CLUP10909 449 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 GSTM3P21266 225 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 CRABP1P29762 137 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 LIPAP38571 399 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 CENPAP49450 140 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 MMP16P51512 607 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 LCN2P80188 198 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 PAX2Q02962 417 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 SPATS1Q496A3 300 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 LINC01590Q5TEZ4 76 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 FAHD2BQ6P2I3 314 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 RASSF6Q6ZTQ3 369 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 LRRC28Q86X40 367 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 SLC37A3Q8NCC5 494 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 DEFB108BQ8NET1 73 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 GJC3Q8NFK1 279 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 OR8G5Q8NG78 346 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 OR9Q1Q8NGQ5 310 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF420Q8TAQ5 688 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 RAB1CQ92928 201 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 DVL3Q92997 716 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 MCUR1Q96AQ8 359 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 DACT3Q96B18 629 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 FAHD2AQ96GK7 314 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 OR2V2Q96R30 315 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 JMJD8Q96S16 334 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 SLC30A2Q9BRI3 323 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 RBM4Q9BWF3 364 aaKnown RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 TRIM15Q9C019 465 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 HDHD2Q9H0R4 259 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 GCM1Q9NP62 436 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 ESM1Q9NQ30 184 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 UBAP1Q9NZ09 502 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 CGGBP1Q9UFW8 167 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 NPTNQ9Y639 398 aa7.44□□□□□ -1.22
ATG4A-205ENST00000394892 SOX21Q9Y651 276 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-205ENST00000394892 IQCF6A8MYZ5 107 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 F5H5P2 479 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 KRT36O76013 467 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 SOX14O95416 240 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 PNPP00491 289 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 RENP00797 406 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 MT-ND5P03915 603 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 HLA-DPB1P04440 258 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 GYPBP06028 91 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 TUBG1P23258 451 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 OTX1P32242 354 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 TRAP1Q12931 704 aaKnown RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 MAB21L1Q13394 359 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 CRMP1Q14194 572 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 TRIM25Q14258 630 aaKnown RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 GK2Q14410 553 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 PCK2Q16822 640 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 SNAI3Q3KNW1 292 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 KLF17Q5JT82 389 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 ARL9Q6T311 187 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 UNQ6126/PRO20091Q6UXV3 157 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 C1QL2Q7Z5L3 287 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 JAZF1Q86VZ6 243 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 ADGRG5Q8IZF4 528 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 LNX2Q8N448 690 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 IQCF1Q8N6M8 205 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 AQP11Q8NBQ7 271 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 BHLHE23Q8NDY6 225 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 APOBEC3DQ96AK3 386 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 DIRC2Q96SL1 478 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 GAL3ST1Q99999 423 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 NIPSNAP1Q9BPW8 284 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 DGCR6LQ9BY27 220 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 NDEL1Q9GZM8 345 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 EGLN1Q9GZT9 426 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 MED20Q9H944 212 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 PATZ1Q9HBE1 687 aaKnown RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 TMEM165Q9HC07 324 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 TUBG2Q9NRH3 451 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 ARMC1Q9NVT9 282 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 IL19Q9UHD0 177 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 TMCC3Q9ULS5 477 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 POLR1DQ9Y2S0 133 aa7.43□□□□□ -1.22
ATG4A-205ENST00000394892 POLR3KQ9Y2Y1 108 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-205ENST00000394892 U3KQV3 271 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms