RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OR5K3A6NET4 321 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF98A6NK75 572 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 WRBO00258 174 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 ICOSLGO75144 302 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 LDOC1O95751 146 aaPredicted RBP11.9□□□□□ -0.51
NFKB1-202ENST00000394820 IFNA21P01568 189 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 OR8U9P0C7N5 309 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 SLC35E2P0CK97 266 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 ABOP16442 354 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 SDHAP31040 664 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 OPRM1P35372 400 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 CD96P40200 585 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 TSFMP43897 325 aaKnown RBP11.9□□□□□ -0.51
NFKB1-202ENST00000394820 EEF1A1P5Q5VTE0 462 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 OR51E1Q8TCB6 317 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.51
NFKB1-202ENST00000394820 TMPRSS13Q9BYE2 586 aa11.9□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF223Q9UK11 482 aaPredicted RBP11.9□□□□□ -0.51
NFKB1-202ENST00000394820 SPTA1P02549 2419 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF726A6NNF4 738 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 HSPB6O14558 160 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 OGG1O15527 345 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 LRP3O75074 770 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ELOCQ15369 112 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CLEC12BQ2HXU8 276 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 FAM57BQ71RH2 274 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 PUSL1Q8N0Z8 303 aaKnown RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 C19orf47Q8N9M1 422 aaKnown RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 PIGTQ969N2 578 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 PNPLA2Q96AD5 504 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 C12orf10Q9HB07 376 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CYR61O00622 381 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 NQO2P16083 231 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CDAP32320 146 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CLRN1P58418 232 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 AVPI1Q5T686 147 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ETV3LQ6ZN32 361 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ADAD2Q8NCV1 583 aaKnown RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 NT5CQ8TCD5 201 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CDC6Q99741 560 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 PRRT1Q99946 306 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 MFSD2BA6NFX1 497 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ZNHIT1O43257 154 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 SNAPINO95295 136 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ARG1P05089 322 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 RPA2P15927 270 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CTLA4P16410 223 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ELAVL1Q15717 326 aaKnown RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 RAB30Q15771 203 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 IAH1Q2TAA2 248 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ACOT7LQ6ZUV0 252 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 ANKRD9Q96BM1 317 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 MRPS24Q96EL2 167 aaKnown RBP11.89□□□□□ -0.51
NFKB1-202ENST00000394820 JAM3Q9BX67 310 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 CHRNA9Q9UGM1 479 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 OR52A1Q9UKL2 312 aa11.89□□□□□ -0.51
NFKB1-202ENST00000394820 A0A1W2PP11 408 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 NUDT21O43809 227 aaKnown RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 SPP1P10451 314 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PNMTP11086 282 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 MFGE8Q08431 387 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 FZD2Q14332 565 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 ATPAF1Q5TC12 328 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 OR4D6Q8NGJ1 314 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 SLC2A12Q8TD20 617 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PGAM5Q96HS1 289 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 A0A087WUJ7 227 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 FAM230AA0A1W2PPH8 454 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 OR6C76A6NM76 312 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 SULT1B1O43704 296 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 MGMTP16455 207 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PSMB6P28072 239 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 CSNK1EP49674 416 aaKnown RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 GPR85P60893 370 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 CCINQ13939 588 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 TMPPEQ6ZT21 453 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 FAM122BQ7Z309 247 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 MISPQ8IVT2 679 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 TMEM104Q8NE00 496 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 OR6C65A6NJZ3 312 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PTP4A3O75365 173 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 WNT11O96014 354 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PNPP00491 289 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF16P17020 682 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PGCP20142 388 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 BLVRBP30043 206 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 RORAP35398 523 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 ACAA2P42765 397 aaKnown RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 BIDP55957 195 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 RAB38P57729 211 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 RPS11P62280 158 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms