RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 PLEKHB1Q9UF11 243 aaPredicted RBP11.88□□□□□ -0.51
PTN-202ENST00000393083 R4GMQ9 66 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 OR6C65A6NJZ3 312 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 TMEM212A6NML5 194 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 C19orf84I3L1E1 186 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 CASKO14936 926 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 PNPP00491 289 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 CLEC2LP0C7M8 214 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 NPR2P20594 1047 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 MYL9P24844 172 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 CALRP27797 417 aaKnown RBP11.88□□□□□ -0.51
PTN-202ENST00000393083 AGTR1P30556 359 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 RPS11P62280 158 aaKnown RBP eCLIP11.88□□□□□ -0.51
PTN-202ENST00000393083 ZNF829Q3KNS6 432 aaPredicted RBP11.88□□□□□ -0.51
PTN-202ENST00000393083 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 ZNF404Q494X3 552 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 YIF1BQ5BJH7 314 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 ZMAT1Q5H9K5 638 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 FAM27D1Q5T7N8 215 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 KLHL24Q6TFL4 600 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 NUFIP2Q7Z417 695 aaKnown RBP11.88□□□□□ -0.51
PTN-202ENST00000393083 CATSPERDQ86XM0 798 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 LRRC18Q8N456 261 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 ZNF676Q8N7Q3 588 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 CNEP1R1Q8N9A8 125 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 RGP1Q92546 391 aaPredicted RBP11.88□□□□□ -0.51
PTN-202ENST00000393083 OR14A2Q96R54 314 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 FOXB1Q99853 325 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 SIAEQ9HAT2 523 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
PTN-202ENST00000393083 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
PTN-202ENST00000393083 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
PTN-202ENST00000393083 ADGRG4Q8IZF6 3080 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 SHISA3A0PJX4 238 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 SMIM30A4D0T7 59 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 PRSS44E7EML9 344 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 ZNF587BE7ETH6 402 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 LOC110117498-PIK3R3F6TDL0 507 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 RER1O15258 196 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 SRSF10O75494 262 aaKnown RBP11.87□□□□□ -0.51
PTN-202ENST00000393083 GATBO75879 557 aaKnown RBP11.87□□□□□ -0.51
PTN-202ENST00000393083 B4GALT1P15291 398 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 HSD11B1P28845 292 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 MTNR1BP49286 362 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 RORCP51449 518 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 CCR9P51686 369 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 HNRNPA0Q13151 305 aaKnown RBP11.87□□□□□ -0.51
PTN-202ENST00000393083 TAF13Q15543 124 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 ODF4Q2M2E3 257 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 ZNF100Q8IYN0 542 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 ACBD4Q8NC06 268 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 DACH2Q96NX9 599 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 TPK1Q9H3S4 243 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 PNRC2Q9NPJ4 139 aaKnown RBP11.87□□□□□ -0.51
PTN-202ENST00000393083 PLSCR4Q9NRQ2 329 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 SLC22A13Q9Y226 551 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 EMC9Q9Y3B6 208 aa11.87□□□□□ -0.51
PTN-202ENST00000393083 A8MXE2 369 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 CST2P09228 141 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 ASCL1P50553 236 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 PSMA6P60900 246 aaKnown RBP11.86□□□□□ -0.51
PTN-202ENST00000393083 STK11Q15831 433 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 GJC3Q8NFK1 279 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 IL17RDQ8NFM7 739 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 OR6K3Q8NGY3 331 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 SLC25A46Q96AG3 418 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 SH3GL3Q99963 347 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 BARHL1Q9BZE3 327 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
PTN-202ENST00000393083 NXF2Q9GZY0 626 aaKnown RBP11.86□□□□□ -0.51
PTN-202ENST00000393083 PPIL3Q9H2H8 161 aaKnown RBP11.86□□□□□ -0.51
PTN-202ENST00000393083 MMP27Q9H306 513 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 C12orf49Q9H741 205 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 UPB1Q9UBR1 384 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 A3GALT2U3KPV4 340 aa11.86□□□□□ -0.51
PTN-202ENST00000393083 TMEM269A0A1B0GVZ9 245 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 ACOD1A6NK06 481 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 ZNF879B4DU55 563 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 EEF1E1-BLOC1S5C9J1V9 151 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 MSTNO14793 375 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 EEF1E1O43324 174 aaKnown RBP11.85□□□□□ -0.51
PTN-202ENST00000393083 ARL6IP5O75915 188 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 UCHL1P09936 223 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 IGFBP2P18065 325 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 COL8A1P27658 744 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 DCTDP32321 178 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 GRB2P62993 217 aaKnown RBP11.85□□□□□ -0.51
PTN-202ENST00000393083 HIST1H3AP68431 136 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 BCL2L15Q5TBC7 163 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 HIST2H3PS2Q5TEC6 136 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 ZNF474Q6S9Z5 364 aaPredicted RBP11.85□□□□□ -0.51
PTN-202ENST00000393083 UNQ9370/PRO34162Q6UXP9 181 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 HIST2H3AQ71DI3 136 aa11.85□□□□□ -0.51
PTN-202ENST00000393083 RHOUQ7L0Q8 258 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms