RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TERTO14746 1132 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 GPRIN2O60269 458 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 AK1P00568 194 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 RENP00797 406 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 CD2P06729 351 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 AKT2P31751 481 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 FMODQ06828 376 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 COMMD2Q86X83 199 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 GVQW1Q8N7I0 195 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 S100PBPQ96BU1 408 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 C20orf24Q9BUV8 137 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF426Q9BUY5 554 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 EDEM2Q9BV94 578 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 SMCO4Q9NRQ5 59 aa11.2□□□□□ -0.62
PRPF40B-202ENST00000380281 C2orf16Q68DN1 1984 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 OR4C45A6NMZ5 311 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 GLSO94925 669 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 CD53P19397 219 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 AGTR1P30556 359 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 MFGE8Q08431 387 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 MOGAT2Q3SYC2 334 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF561Q8N587 486 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 TEX19Q8NA77 164 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 PPP1R1CQ8WVI7 109 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 NRIP2Q9BQI9 281 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 EMC6Q9BV81 110 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 RNF122Q9H9V4 155 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 COMMD9Q9P000 198 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 EMC9Q9Y3B6 208 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 LOC101059948A0A1B0GTJ6 334 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 A0A1W2PPH5 198 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 GGT3PA6NGU5 568 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 ARGFXA6NJG6 315 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 CTAG2O75638 210 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 RAB3DO95716 219 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 SEMA4FO95754 770 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 SFTA3P0C7M3 94 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC2A1P11166 492 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 IL11P20809 199 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 CASRP41180 1078 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 KIR3DL2P43630 455 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 PRPS1P60891 318 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 DEFB133Q30KQ1 61 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 STEAP1BQ6NZ63 245 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC16A9Q7RTY1 509 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 FOXRED2Q8IWF2 684 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 SSX3Q99909 188 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 G6PC3Q9BUM1 346 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 SELENOIQ9C0D9 397 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 APMAPQ9HDC9 416 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 RCC2Q9P258 522 aaKnown RBP11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 VDAC3Q9Y277 283 aa11.19□□□□□ -0.62
PRPF40B-202ENST00000380281 A6NCN8 305 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 UTS2O95399 124 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 AKR1C4P17516 323 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 PI3P19957 117 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 MECP2P51608 486 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 C19orf47Q8N9M1 422 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 OR1J2Q8NGS2 313 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC25A44Q96H78 314 aaPredicted RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 NECAB3Q96P71 396 aaPredicted RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC6A7Q99884 636 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 TOLLIPQ9H0E2 274 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 A0A0B4J2A0 478 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 H3BML4 177 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF264O43296 627 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 TNFSF14O43557 240 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 SNRNP70P08621 437 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 FOLR2P14207 255 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 FAUP35544 74 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 RBM34P42696 430 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 ACKR1Q16570 336 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 CDNFQ49AH0 187 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF813Q6ZN06 617 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 PPP1R3BQ86XI6 285 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 TBL1XR1Q9BZK7 514 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 TMPRSS5Q9H3S3 457 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 SHPKQ9UHJ6 478 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 METTL12A8MUP2 240 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 PHYHO14832 338 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 OR2F2O95006 317 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 IGHV2-5P01817 119 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 OR4E1P0C645 316 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 CTLA4P16410 223 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 AGAP20933 346 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 GPR3P46089 330 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 HTR5AP47898 357 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 DNASE1L1P49184 302 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 CHAF1BQ13112 559 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 TDGQ13569 410 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms