RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RPL18Q07020 188 aaKnown RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SNTB2Q13425 540 aaKnown RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TOMM20Q15388 145 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ZNF239Q16600 458 aaKnown RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 DEFB109BQ30KR1 87 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PLPPR5Q32ZL2 321 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SLC25A25Q6KCM7 469 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MTFR2Q6P444 385 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 Q6ZS92 163 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 RFPL4BQ6ZWI9 263 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 LINGO2Q7L985 606 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TMEM178AQ8NBL3 297 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 BVESQ8NE79 360 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PHOSPHO1Q8TCT1 267 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TAAR8Q969N4 342 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MNTQ99583 582 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 VSX1Q9NZR4 365 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PPP4R1LQ9P1A2 415 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 KLHL9Q9P2J3 617 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 BOKQ9UMX3 212 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 IGLV1-36A0A0B4J1U3 117 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 A0A1B0GTH9 108 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TMEM272A0A1B0GTI8 110 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TUBAL3A6NHL2 446 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 C17orf51A8MQB3 221 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SNRPGP15A8MWD9 76 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 H0YC42 278 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PDCD5O14737 125 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 CRYZL1O95825 349 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PTHLHP12272 177 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 M6PRP20645 277 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PTGS2P35354 604 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 RAD52P43351 418 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 POLR2HP52434 150 aaKnown RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ID3Q02535 119 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ROM1Q03395 351 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 C2orf68Q2NKX9 166 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 LIPNQ5VXI9 398 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 GTPBP8Q8N3Z3 284 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 BEST4Q8NFU0 473 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 OR2M7Q8NG81 312 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 OR2G2Q8NGZ5 317 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SYNPRQ8TBG9 265 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SNX33Q8WV41 574 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 C4orf45Q96LM5 186 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SIGLEC12Q96PQ1 595 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ARPC5LQ9BPX5 153 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 WDR76Q9H967 626 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ACKR4Q9NPB9 350 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 FANCFQ9NPI8 374 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MED9Q9NWA0 146 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MRPL22Q9NWU5 206 aaKnown RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 KLRF1Q9NZS2 232 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 DCHS1Q96JQ0 3298 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 KIAA1549Q9HCM3 1950 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 CEP250Q9BV73 2442 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SEC16AO15027 2179 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MED19A0JLT2 244 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TMEM72A0PK05 275 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 KLRC4-KLRK1H3BQV0 150 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MASP2O00187 686 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 GNB5O14775 395 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 XRCC3O43542 346 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 SLC25A12O75746 678 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ALDOBP05062 364 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 OR8G3PP0DMU2 310 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 RRASP10301 218 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 DCTDP32321 178 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 INPP1P49441 399 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 EFNB2P52799 333 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 LGALS3BPQ08380 585 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 MFSD13AQ14CX5 517 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PCK2Q16822 640 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ANKRD16Q6P6B7 361 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ZCCHC14Q8WYQ9 949 aaKnown RBP6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ZFP3Q96NJ6 502 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 DHRS9Q9BPW9 319 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 PTGES2Q9H7Z7 377 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 CLEC4AQ9UMR7 237 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 ING4Q9UNL4 249 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
CDKL5-202ENST00000379996 TRAV17A0A0B4J275 112 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 WIPF3A6NGB9 483 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 C1QTNF9BB2RNN3 333 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 H7C417 338 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 CTAG2O75638 210 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 KRT33AO76009 404 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 GIPP09681 153 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-202ENST00000379996 C1QTNF9P0C862 333 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 CLDN12P56749 244 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 SRSF4Q08170 494 aaKnown RBP6.84□□□□□ -1.31
CDKL5-202ENST00000379996 RNASE12Q5GAN4 147 aaKnown RBP6.84□□□□□ -1.31
CDKL5-202ENST00000379996 TMEM65Q6PI78 240 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 NHLRC1Q6VVB1 395 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 GLB1L2Q8IW92 636 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 ADPRHL1Q8NDY3 354 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 OR1J4Q8NGS1 313 aa6.84□□□□□ -1.31
CDKL5-202ENST00000379996 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
CDKL5-202ENST00000379996 NARFLQ9H6Q4 476 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms