RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CECR9P0C854 216 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 MYL12AP19105 171 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 CSNK1A1P48729 337 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 GLO1Q04760 184 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 SLC25A47Q6Q0C1 308 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 GPR137CQ8N3F9 429 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 ACBD7Q8N6N7 88 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 OR51L1Q8NGJ5 315 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 MNTQ99583 582 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 ACOT13Q9NPJ3 140 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 GLTPQ9NZD2 209 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 TMEM129A0AVI4 362 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 B9A039 149 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 NDUFS8O00217 210 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 SLC43A1O75387 559 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 ADRA2AP08913 450 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 NR4A2P43354 598 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 IDH3GP51553 393 aaPredicted RBP11.87□□□□□ -0.51
PRPF18-202ENST00000378572 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
PRPF18-202ENST00000378572 NAAAQ02083 359 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 C10orf128Q5T292 105 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 UBE2UQ5VVX9 321 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 ANKRD16Q6P6B7 361 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 DYNLRB1Q9NP97 96 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 MYOZ1Q9NP98 299 aaPredicted RBP11.87□□□□□ -0.51
PRPF18-202ENST00000378572 TMEM160Q9NX00 188 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 CHCHD3Q9NX63 227 aaKnown RBP11.87□□□□□ -0.51
PRPF18-202ENST00000378572 ERGIC3Q9Y282 383 aa11.87□□□□□ -0.51
PRPF18-202ENST00000378572 VSTM5A8MXK1 200 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 APOL3O95236 402 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 OR2T7P0C7T2 308 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 FMODQ06828 376 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ADIPOQQ15848 244 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MST1LQ2TV78 715 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 LINGO2Q7L985 606 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 SLC16A9Q7RTY1 509 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 NANOGP1Q8N7R0 232 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 OR2T27Q8NH04 317 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MCHR2Q969V1 340 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MUL1Q969V5 352 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 FOXN4Q96NZ1 517 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ZNF649Q9BS31 505 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MND1Q9BWT6 205 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 LINC00470Q9BZP3 86 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 YIPF3Q9GZM5 350 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 RAB1BQ9H0U4 201 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 SEC61A2Q9H9S3 476 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MOV10Q9HCE1 1003 aaKnown RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 COA3Q9Y2R0 106 aaPredicted RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 CUBNO60494 3623 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 IGKV1D-43A0A0B4J1Z2 117 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 IGHV4-61A0A0C4DH41 118 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 C12orf71A8MTZ7 269 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MYL12BO14950 172 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 SEC14L2O76054 403 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 TFP02787 698 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 GAAP10253 952 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 PAX7P23759 505 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ARF1P84077 181 aaKnown RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 HSF2Q03933 536 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 DBPQ10586 325 aaPredicted RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 NEDD8Q15843 81 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 CARD17Q5XLA6 110 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 LRFN4Q6PJG9 635 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 FOXL2NBQ6ZUU3 175 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 SHFQ7M4L6 423 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ZNF367Q7RTV3 350 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 EGFL6Q8IUX8 553 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 GLB1L2Q8IW92 636 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ZNF511Q8NB15 262 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 SLC26A10Q8NG04 563 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 OR6N1Q8NGY5 312 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 RORBQ92753 470 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 INTS14Q96SY0 518 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
PRPF18-202ENST00000378572 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 RERGLQ9H628 205 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ERVK13-1Q9NX77 482 aa11.86□□□□□ -0.51
PRPF18-202ENST00000378572 ZNF99A8MXY4 864 aaPredicted RBP11.85□□□□□ -0.51
PRPF18-202ENST00000378572 SELENOFO60613 162 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 TGFAP01135 160 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 PTHP01270 115 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 CELA3BP08861 270 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 MRPL3P09001 348 aaKnown RBP11.85□□□□□ -0.51
PRPF18-202ENST00000378572 QDPRP09417 244 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 CALCRP30988 508 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 MAP2K4P45985 399 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 ETV1P50549 477 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 SRSF2Q01130 221 aaKnown RBP11.85□□□□□ -0.51
PRPF18-202ENST00000378572 CEACAM16Q2WEN9 425 aa11.85□□□□□ -0.51
PRPF18-202ENST00000378572 TEX30Q5JUR7 227 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms