RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 BPIFCQ8NFQ6 507 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR4D6Q8NGJ1 314 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ROBO4Q8WZ75 1007 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 HGDQ93099 445 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ELSPBP1Q96BH3 223 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 DEFB126Q9BYW3 111 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ZNF700Q9H0M5 742 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PCDHB10Q9UN67 800 aa12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TRAPPC6AO75865 159 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 NAT1P18440 290 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TMEM156Q8N614 296 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR52N5Q8NH56 324 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PIPOXQ9P0Z9 390 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FAM74A7A6NL05 159 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LYPD3O95274 346 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OPRM1P35372 400 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 POLR2HP52434 150 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ZNF141Q15928 474 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MEX3BQ6ZN04 569 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CBLN2Q8IUK8 224 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PELOQ9BRX2 385 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 RBM7Q9Y580 266 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 POLEQ07864 2286 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PLSCR5A0PG75 271 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MED6O75586 246 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 EGR4Q05215 589 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MFSD13AQ14CX5 517 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ATPAF1Q5TC12 328 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 IQCF2Q8IXL9 164 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SLAMF6Q96DU3 332 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SEH1LQ96EE3 360 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TMEM59Q9BXS4 323 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CNTD2Q9H8S5 307 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 RABL2BQ9UNT1 228 aa12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 C14orf166Q9Y224 244 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SLC22A23A1A5C7 686 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GSTZ1O43708 216 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CFIP05156 583 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CLVS2Q5SYC1 327 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR2W3Q7Z3T1 314 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CDC6Q99741 560 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PLEK2Q9NYT0 353 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SLC5A6Q9Y289 635 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 HSPB6O14558 160 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OMGP23515 440 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CAPZBP47756 277 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 RAG2P55895 527 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 INSM1Q01101 510 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 NICN1Q9BSH3 213 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CRB3Q9BUF7 120 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SLC2A4RGQ9NR83 387 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 EDARQ9UNE0 448 aa12.9□□□□□ -0.34
TNFRSF1B-201ENST00000376259 RER1O15258 196 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SHOXO15266 292 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DUX1O43812 170 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IGHV3-9P01782 118 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HNRNPKP61978 463 aaKnown RBP eCLIP12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CEBPEQ15744 281 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CDC20BQ86Y33 519 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 EID2Q8N6I1 236 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ADAD2Q8NCV1 583 aaKnown RBP12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ASB5Q8WWX0 329 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PNPLA2Q96AD5 504 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SLC25A21Q9BQT8 299 aaPredicted RBP12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NKX6-2Q9C056 277 aaPredicted RBP12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C1orf198Q9H425 327 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF160Q9HCG1 818 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GPR84Q9NQS5 396 aa12.9□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF254O75437 659 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 JMJD7P0C870 316 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ASCL1P50553 236 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SKP2Q13309 424 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PTPMT1Q8WUK0 201 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CTHRC1Q96CG8 243 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 URM1Q9BTM9 101 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RPS10P5Q9NQ39 176 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PLEKHJ1Q9NW61 149 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OBP2AQ9NY56 170 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SPTA1P02549 2419 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 STMND1H3BQB6 276 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SULT2B1O00204 365 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HSF1Q00613 529 aa12.89□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C20orf196Q8IYI0 205 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms