RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 COMMD3-BMI1R4GMX3 469 aa13.21□□□□□ -0.29
SDHB-201ENST00000375499 TCRBV3S1A0A5B6 114 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 MT-ND5P03915 603 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 CD55P08174 381 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 ACSM4P0C7M7 580 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 SRD5A1P18405 259 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 FLOT2Q14254 428 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 CR1LQ2VPA4 569 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 SPATA24Q86W54 205 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 ZNF511Q8NB15 262 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 GIPC3Q8TF64 312 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 HAVCR1Q96D42 359 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 ELMOD3Q96FG2 381 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 PITX2Q99697 317 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 HCAR1Q9BXC0 346 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 CADM1Q9BY67 442 aaKnown RBP13.2□□□□□ -0.3
SDHB-201ENST00000375499 MED20Q9H944 212 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 LPAR2Q9HBW0 351 aa13.2□□□□□ -0.3
SDHB-201ENST00000375499 ARRDC5A6NEK1 342 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 F5H5K5 113 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 DEAF1O75398 565 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 SPI1P17947 270 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 TNFAIP6P98066 277 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 BNIP1Q12981 228 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 LINC01590Q5TEZ4 76 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 FBXW12Q6X9E4 464 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 ZNF771Q7L3S4 317 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 OR2T4Q8NH00 348 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 ITLN1Q8WWA0 313 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 CCL17Q92583 94 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 APOBEC3DQ96AK3 386 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 DCLRE1CQ96SD1 692 aaKnown RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 ATF6BQ99941 703 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
SDHB-201ENST00000375499 PDP1Q9P0J1 537 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 CGGBP1Q9UFW8 167 aaPredicted RBP13.19□□□□□ -0.3
SDHB-201ENST00000375499 WNK2Q9Y3S1 2297 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 FAM183AA6NL82 134 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 CLDN25C9JDP6 229 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 J3QW42 95 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 GSC2O15499 205 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 FKBP6O75344 327 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 RAC2P15153 192 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 HNF1AP20823 631 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 PRKACGP22612 351 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 LIPAP38571 399 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 RGS6P49758 472 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 SLC25A1P53007 311 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 HFEQ30201 348 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 ACSM5Q6NUN0 579 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 OR2Z1Q8NG97 314 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 OR10AD1Q8NGE0 317 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 OR2AJ1Q8NGZ0 328 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 PTP4A1Q93096 173 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 POP5Q969H6 163 aaKnown RBP13.18□□□□□ -0.3
SDHB-201ENST00000375499 C1QTNF5Q9BXJ0 243 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 CMC2Q9NRP2 79 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 ZDHHC8Q9ULC8 765 aa13.18□□□□□ -0.3
SDHB-201ENST00000375499 H0YL77 283 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 MLNRO43193 412 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 IGHV2-5P01817 119 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 TUBG1P23258 451 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 DVL1P1P54792 670 aaPredicted RBP13.17□□□□□ -0.3
SDHB-201ENST00000375499 CBX1P83916 185 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 SRSF2Q01130 221 aaKnown RBP13.17□□□□□ -0.3
SDHB-201ENST00000375499 GK3PQ14409 553 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 PCK2Q16822 640 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 ZMAT1Q5H9K5 638 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 DCXRQ7Z4W1 244 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 PAPD5Q8NDF8 572 aaKnown RBP13.17□□□□□ -0.3
SDHB-201ENST00000375499 BHLHE23Q8NDY6 225 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 OR6K6Q8NGW6 343 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 TEX47Q8TBZ9 253 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 SIGLEC11Q96RL6 698 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 CDADC1Q9BWV3 514 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 ZNF665Q9H7R5 613 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 NTN4Q9HB63 628 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 TUBG2Q9NRH3 451 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 DDX28Q9NUL7 540 aaKnown RBP13.17□□□□□ -0.3
SDHB-201ENST00000375499 KCNG2Q9UJ96 466 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 BAIAP2Q9UQB8 552 aa13.17□□□□□ -0.3
SDHB-201ENST00000375499 IGHV3-64DA0A0J9YX35 117 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 B4DSR2 109 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 H3BN98 237 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 M0R135 149 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 SPARCP09486 303 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 ZNF823P16415 610 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 SELEP16581 610 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 ZNF3P17036 446 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
SDHB-201ENST00000375499 GRK5P34947 590 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 ENTPD1P49961 510 aa13.16□□□□□ -0.3
SDHB-201ENST00000375499 GK2Q14410 553 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms