RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 BLKP51451 505 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 LSM6P62312 80 aaKnown RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 OR4C11Q6IEV9 310 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 FBXO42Q6P3S6 717 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 RAB24Q969Q5 203 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 SCARF2Q96GP6 870 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 FKRPQ9H9S5 495 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 LHX9Q9NQ69 397 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 CNTRLQ7Z7A1 2325 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 PATE3B3GLJ2 98 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 CTAG2O75638 210 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 HMGN2P05204 90 aaKnown RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 NR2C1P13056 603 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 NTSP30990 170 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 NAA10P41227 235 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 NCBP2P52298 156 aaKnown RBP eCLIP10.93□□□□□ -0.666e-7■■■■■ 27.1
C9orf3-203ENST00000375315 ARL14Q8N4G2 192 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 ACOT4Q8N9L9 421 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 OR7G2Q8NG99 324 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 ASB17Q8WXJ9 295 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF764Q96H86 408 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 C20orf24Q9BUV8 137 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 SYT4Q9H2B2 425 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 A6NCN8 305 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 PPP1R2P9O14990 202 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 SRPX2O60687 465 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 HEXBP07686 556 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 ERGP11308 486 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 MAKP20794 623 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 MAS1LP35410 378 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 PPICP45877 212 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 SLC6A9P48067 706 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 NR0B2Q15466 257 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 ZIC1Q15915 447 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 SCGB2B2Q4G0G5 96 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 HIST2H3PS2Q5TEC6 136 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 BTNL8Q6UX41 500 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 THSD4Q6ZMP0 1018 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 FRRS1Q6ZNA5 592 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 SLC35F3Q8IY50 421 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 C19orf47Q8N9M1 422 aaKnown RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 AMDHD1Q96NU7 426 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 PELI2Q9HAT8 420 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 ZDHHC8Q9ULC8 765 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 PCDH15Q96QU1 1955 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 TRBV6-7A0A0A0MS04 114 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 MKRN2OSH3BPM6 223 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 M0QYG6 137 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 PLGP00747 810 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-203ENST00000375315 CEACAM6P40199 344 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 CYCSP99999 105 aaKnown RBP10.92□□□□□ -0.66
C9orf3-203ENST00000375315 ACY1Q03154 408 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 TOMM20Q15388 145 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 GPX8Q8TED1 209 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 GAL3ST3Q96A11 431 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 ZG16BQ96DA0 208 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 RAB11FIP5Q9BXF6 653 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 KCNG2Q9UJ96 466 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 LOC100509620A0A075B734 347 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 A0A1W2PPE2 198 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 H0YGG7 62 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 DCTN6O00399 190 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 LRP3O75074 770 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 AK1P00568 194 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 SERPINA5P05154 406 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 LIPCP11150 499 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 ZBTB25P24278 435 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 ARF3P61204 181 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-203ENST00000375315 IL13RA1P78552 427 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 PLA2G7Q13093 441 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 SLC9A5Q14940 896 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 Q499Y3 187 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 TMEM64Q6YI46 380 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 KCTD9Q7L273 389 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 VN1R4Q7Z5H5 301 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 OOSP2Q86WS3 158 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 PRSS58Q8IYP2 241 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 BPIFB2Q8N4F0 458 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 PNLDC1Q8NA58 520 aaKnown RBP10.92□□□□□ -0.66
C9orf3-203ENST00000375315 RGP1Q92546 391 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-203ENST00000375315 MS4A6EQ96DS6 147 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 SPACA1Q9HBV2 294 aa10.92□□□□□ -0.66
C9orf3-203ENST00000375315 ELOA3CA0A087WX78 387 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF726A6NNF4 738 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF587BE7ETH6 402 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 K7ESF4 209 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 CDC40O60508 579 aaKnown RBP eCLIP10.91□□□□□ -0.664e-7■■■■□ 25.7
C9orf3-203ENST00000375315 RNH1P13489 461 aaKnown RBP10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ADRA2CP18825 462 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 CD1CP29017 333 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 OR1D5P58170 312 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 ELOCQ15369 112 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 OR2A2Q6IF42 318 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 HEPN1Q6WQI6 88 aa10.91□□□□□ -0.66
C9orf3-203ENST00000375315 OR2L13Q8N349 312 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms