RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ZNF585AQ6P3V2 769 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 FAM180AQ6UWF9 173 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 LRRTM1Q86UE6 522 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 OR8B12Q8NGG6 310 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 AKR7LQ8NHP1 331 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 TMEM106AQ96A25 262 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 SOX7Q9BT81 388 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 OR2H1Q9GZK4 316 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 SLC25A18Q9H1K4 315 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 PLEK2Q9NYT0 353 aa13.73□□□□□ -0.21
NIPAL3-204ENST00000374399 A0A096LPE4 126 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 A0A1W2PPZ6 126 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 SGCEO43556 437 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 ACHEP22303 614 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 GALK2Q01415 458 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 TAF13Q15543 124 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 SFXN4Q6P4A7 337 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 STAC2Q6ZMT1 411 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 ZNF704Q6ZNC4 412 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 SLC16A14Q7RTX9 510 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 CCDC190Q86UF4 302 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 UBE2J2Q8N2K1 259 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 RPRMLQ8N4K4 120 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 NOX3Q9HBY0 568 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 SLC17A5Q9NRA2 495 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 UPB1Q9UBR1 384 aa13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 AK6Q9Y3D8 172 aaKnown RBP13.72□□□□□ -0.21
NIPAL3-204ENST00000374399 MED19A0JLT2 244 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 MBD3L4A6NDZ8 208 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 MBD3L3A6NE82 208 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 MBD3L5A6NJ08 208 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 CLDN25C9JDP6 229 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 J3QRK9 145 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 IGLV3-1P01715 115 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 RAF1P04049 648 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 RAB3BP20337 219 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 ETV6P41212 452 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 SCRN3Q0VDG4 424 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 PRR30Q53SZ7 412 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 SFRP5Q5T4F7 317 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 ZNF544Q6NX49 715 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 VWA1Q6PCB0 445 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 LAX1Q8IWV1 398 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 CPEB3Q8NE35 698 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 OR1F12Q8NHA8 337 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 MBD3L2Q8NHZ7 208 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 SLX1AQ9BQ83 275 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 MOB1AQ9H8S9 216 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 SLC24A3Q9HC58 644 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 TUBD1Q9UJT1 453 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 HHLA2Q9UM44 414 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 TIMM10BQ9Y5J6 103 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 PEX16Q9Y5Y5 336 aa13.71□□□□□ -0.21
NIPAL3-204ENST00000374399 F5H5K5 113 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 TNFSF13O75888 250 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 UBCP0CG48 685 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 SLC2A2P11168 524 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 EPXP11678 715 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 MAPK3P27361 379 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 MPGP29372 298 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 TNFSF8P32971 234 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 TMEM244Q5VVB8 128 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 FAM57BQ71RH2 274 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ZGRF1Q86YA3 2104 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ZNF283Q8N7M2 679 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 OR1K1Q8NGR3 316 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 BCL2L2Q92843 193 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 WDFY2Q96P53 400 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 HDHD2Q9H0R4 259 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ABCB9Q9NP78 766 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 CRNNQ9UBG3 495 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 IGFBP3P17936 291 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ATF1P18846 271 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 CCL1P22362 96 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ITPR1Q14643 2758 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 CD163Q86VB7 1156 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 NAXEQ8NCW5 288 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 FAM57AQ8TBR7 257 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 OR51E1Q8TCB6 317 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 TSEN15Q8WW01 171 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 SNRNP40Q96DI7 357 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 LYZL4Q96KX0 146 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 WACQ9BTA9 647 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 DHDHQ9UQ10 334 aa13.7□□□□□ -0.22
NIPAL3-204ENST00000374399 ARPC4-TTLL3A0A0A6YYG9 625 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 NOTOA8MTQ0 251 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 M0R135 149 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 CGAP01215 116 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 HLA-HP01893 362 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 TPOP07202 933 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 IGHV1-2P23083 117 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 PCBD1P61457 104 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 PABPC1L2AQ5JQF8 200 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 IDNKQ5T6J7 187 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 S100ZQ8WXG8 99 aa13.69□□□□□ -0.22
NIPAL3-204ENST00000374399 ZNF799Q96GE5 643 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms