RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 H0YIZ8 118 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 PHYHO14832 338 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 EFSO43281 561 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 IL2RAP01589 272 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 PMP2P02689 132 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 RNH1P13489 461 aaKnown RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 CTLA4P16410 223 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 GNB3P16520 340 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 MEF2DQ14814 521 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 TOMM34Q15785 309 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 EMC4Q5J8M3 183 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 MARCH1Q8TCQ1 289 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 RNF126Q9BV68 326 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 CYTL1Q9NRR1 136 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 SEC16AO15027 2179 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 SOX1O00570 391 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 MUC1P15941 1255 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 HLA-GP17693 338 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 TOMM20Q15388 145 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 ACKR1Q16570 336 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 FDX2Q6P4F2 183 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 SLC29A4Q7RTT9 530 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 ZNF321PQ8N8H1 164 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 C19orf47Q8N9M1 422 aaKnown RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 SLC30A7Q8NEW0 376 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 NUBPLQ8TB37 319 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 FBXO17Q96EF6 278 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 MMABQ96EY8 250 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 MAP3K3Q99759 626 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 ACKR4Q9NPB9 350 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 TMEM100Q9NV29 134 aa13.25□□□□□ -0.29
COL9A2-202ENST00000372748 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 MRPS33Q9Y291 106 aaKnown RBP13.25□□□□□ -0.29
COL9A2-202ENST00000372748 TEX13DA0A0J9YY54 714 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 F8VVB4 439 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 F8VWA3 439 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 RAB27BO00194 218 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 LDLRAD4O15165 306 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ADAP1O75689 374 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ABOP16442 354 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 IGFBP3P17936 291 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 PI3P19957 117 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 RIDAP52758 137 aaKnown RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 INSM1Q01101 510 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 MST1LQ2TV78 715 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 STOML3Q8TAV4 291 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 CLEC1BQ9P126 229 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 CYP8B1Q9UNU6 501 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 TMEM184BQ9Y519 407 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 CLDN16Q9Y5I7 305 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 LOC107986453A0A1B0GWG9 222 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 SCDO00767 359 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ZNF264O43296 627 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 NUDT14O95848 222 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 IFNA6P05013 189 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 THEGLP0DJG4 465 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ARRB1P49407 418 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ZNF260Q3ZCT1 412 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 IGSF11Q5DX21 431 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 CATSPERDQ86XM0 798 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 ARHGEF39Q8N4T4 335 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 AQP3Q92482 292 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 THRSPQ92748 146 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 CDCA3Q99618 268 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-202ENST00000372748 NRIP2Q9BQI9 281 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 SEC11CQ9BY50 192 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 CNTD2Q9H8S5 307 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 RHOFQ9HBH0 211 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 MMP26Q9NRE1 261 aa13.24□□□□□ -0.29
COL9A2-202ENST00000372748 KIR2DS5A0A0G2JLQ3 304 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 A0A0G2JNG1 304 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 PRSS37A4D1T9 235 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 KIR2DS3K7RE56 304 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 EIF1AYO14602 144 aaKnown RBP13.23□□□□□ -0.29
COL9A2-202ENST00000372748 SGCEO43556 437 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 ZNF806P0C7X5 589 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 EIF1AXP47813 144 aaKnown RBP13.23□□□□□ -0.29
COL9A2-202ENST00000372748 S100A12P80511 92 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 PJVKQ0ZLH3 352 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 KIR2DS5Q14953 304 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 SLC9A3R2Q15599 337 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 ELAVL1Q15717 326 aaKnown RBP13.23□□□□□ -0.29
COL9A2-202ENST00000372748 KDM8Q8N371 416 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 OR2I1PQ8NGU4 316 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 C8orf44Q96CB5 159 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 ADOQ96SZ5 270 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 UBQLN4Q9NRR5 601 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 DUS4LO95620 317 aaKnown RBP13.23□□□□□ -0.29
COL9A2-202ENST00000372748 RABIFP47224 123 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 NR0B1P51843 470 aaKnown RBP13.23□□□□□ -0.29
COL9A2-202ENST00000372748 ZP2Q05996 745 aa13.23□□□□□ -0.29
COL9A2-202ENST00000372748 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
COL9A2-202ENST00000372748 SGCAQ16586 387 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms