RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PLPP5Q8NEB5 264 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 FGGYQ96C11 551 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 NPIPA1Q9UND3 350 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ADAMTS9Q9P2N4 1935 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 A0A1B0GX78 115 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 LBX1P52954 281 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ZMYND11Q15326 602 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 OR7A5Q15622 319 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 NKPD1Q17RQ9 610 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 C1orf189Q5VU69 101 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ARSKQ6UWY0 536 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 C16orf47Q6ZP98 133 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-202ENST00000372621 TRAPPC6BQ86SZ2 158 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 OR52N4Q8NGI2 321 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 MITD1Q8WV92 249 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 CST11Q9H112 138 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 DUSP15Q9H1R2 295 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-202ENST00000372621 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 MED29Q9NX70 200 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 KLHL13Q9P2N7 655 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 CTSFQ9UBX1 484 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 NOP16Q9Y3C1 178 aaKnown RBP11.36□□□□□ -0.59
CTPS1-202ENST00000372621 UNC13CQ8NB66 2214 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 BCL2L11O43521 198 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 H2BFMP0C1H6 154 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CXADRP78310 365 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 HSF1Q00613 529 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 SLC22A6Q4U2R8 563 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 RNASE10Q5GAN6 216 aaKnown RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 TSTD1Q8NFU3 115 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 OR52H1Q8NGJ2 320 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 ADAT3Q96EY9 351 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 C9orf170A2RU37 121 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CCSO14618 274 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 BPNT1O95861 308 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CSN2P05814 226 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 VSIG8P0DPA2 414 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 APOBEC1P41238 236 aaKnown RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 POU3F1Q03052 451 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CDNFQ49AH0 187 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 OR10S1Q8NGN2 331 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 OR10K1Q8NGX5 313 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 PPP1R1CQ8WVI7 109 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 NKD1Q969G9 470 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 UQCC2Q9BRT2 126 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 PTGES2Q9H7Z7 377 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CHST11Q9NPF2 352 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 SUSD2Q9UGT4 822 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CYB5R1Q9UHQ9 305 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 CD96P40200 585 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 ARL4DP49703 201 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 ATP1B3P54709 279 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FOXL2P58012 376 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 HNRNPKP61978 463 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FAM74A1Q5RGS3 127 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 LIN54Q6MZP7 749 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FAHD2BQ6P2I3 314 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 APCDD1LQ8NCL9 501 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FAM46BQ96A09 425 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 SLAMF6Q96DU3 332 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FAHD2AQ96GK7 314 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 VRK1Q99986 396 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 NUDT16L1Q9BRJ7 211 aaKnown RBP11.35□□□□□ -0.59
CTPS1-202ENST00000372621 FN3KRPQ9HA64 309 aa11.35□□□□□ -0.59
CTPS1-202ENST00000372621 ETV2O00321 342 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-202ENST00000372621 SMAD9O15198 467 aaKnown RBP11.34□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF208O43345 1280 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 LIPCP11150 499 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 FBXW4P57775 412 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 C17orf67Q0P5P2 114 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 COX15Q7KZN9 410 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-202ENST00000372621 SLC22A24Q8N4F4 322 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 C11orf40Q8WZ69 217 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF501Q96CX3 271 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-202ENST00000372621 PHYHIPLQ96FC7 376 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 SEC22AQ96IW7 307 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 PBOV1Q9GZY1 135 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 TMEM185BQ9H7F4 350 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 SLC22A11Q9NSA0 550 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 CENPMQ9NSP4 180 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 IGHV3-20A0A0C4DH32 117 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 KANTRA0A1W2PQU2 76 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 FOSL2P15408 326 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 GSK3AP49840 483 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 LUMP51884 338 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-202ENST00000372621 CLDN6P56747 220 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 TLE3Q04726 772 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 TAF13Q15543 124 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 ATRAIDQ6UW56 229 aa11.34□□□□□ -0.59
CTPS1-202ENST00000372621 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms