RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SLC16A9Q7RTY1 509 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 CNEP1R1Q8N9A8 125 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 OR5M1Q8NGP8 315 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 OR13C2Q8NGS9 318 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 OR51A7Q8NH64 312 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 PFN4Q8NHR9 129 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 HIST1H2ACQ93077 130 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 PGLYRP3Q96LB9 341 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 FOXC2Q99958 501 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 GHITMQ9H3K2 345 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 RNF122Q9H9V4 155 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 BRD7Q9NPI1 651 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 MEPEQ9NQ76 525 aaPredicted RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 GLRX2Q9NS18 164 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 FBXO34Q9NWN3 711 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 DNAJB12Q9NXW2 375 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 KLHL9Q9P2J3 617 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 NDRG3Q9UGV2 375 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 V9GY05 133 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 PRRC2AP48634 2157 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 AKAP6Q13023 2319 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 A0A0A6YYJ9 748 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 A0A0G2JK05 382 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 FAM221AA4D161 298 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 SERINC4A6NH21 518 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 A6NNC1 897 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 NPIPB9F8W1W9 429 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF264O43296 627 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 EIF4E2O60573 245 aaKnown RBP9.18□□□□□ -0.94
COL5A1-202ENST00000371820 KRT33AO76009 404 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 NCR1O76036 304 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 TXNDC12O95881 172 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 PLGP00747 810 aaPredicted RBP9.18□□□□□ -0.94
COL5A1-202ENST00000371820 CSTAP01040 98 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 IL5P05113 134 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 EIF4EP06730 217 aaKnown RBP9.18□□□□□ -0.94
COL5A1-202ENST00000371820 CD79BP40259 229 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 CCR9P51686 369 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 SUCLG1P53597 346 aaKnown RBP9.18□□□□□ -0.94
COL5A1-202ENST00000371820 FXYD6P3P58550 94 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 ARPC4P59998 168 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF117Q03924 483 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 EGR3Q06889 387 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 CBFBQ13951 182 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 DAZAP2Q15038 168 aaPredicted RBP9.18□□□□□ -0.94
COL5A1-202ENST00000371820 CD226Q15762 336 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 SLC36A2Q495M3 483 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 KLHL26Q53HC5 615 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 HMGN2P46Q86SG4 172 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 GGNQ86UU5 652 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 JAZF1Q86VZ6 243 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 UBE2J2Q8N2K1 259 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 MOSPD2Q8NHP6 518 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF417Q8TAU3 575 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 FNDC9Q8TBE3 224 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 RPS4Y2Q8TD47 263 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 SMIM4Q8WVI0 70 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 TMEM234Q8WY98 164 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 YIPF5Q969M3 257 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 PHF21AQ96BD5 680 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 UPRTQ96BW1 309 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 POM121Q96HA1 1249 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF845Q96IR2 970 aaPredicted RBP9.18□□□□□ -0.94
COL5A1-202ENST00000371820 MRGPRX4Q96LA9 322 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 KLHL15Q96M94 604 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 TBX5Q99593 518 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 TCF7L1Q9HCS4 588 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 B3GAT2Q9NPZ5 323 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 NANSQ9NR45 359 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 C20orf141Q9NUB4 165 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 ELOVL5Q9NYP7 299 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 MALT1Q9UDY8 824 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 FBXL3Q9UKT7 428 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 PROCRQ9UNN8 238 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 EMC9Q9Y3B6 208 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 IER3IP1Q9Y5U9 82 aa9.18□□□□□ -0.94
COL5A1-202ENST00000371820 DOCK7Q96N67 2140 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 KIAA1549Q9HCM3 1950 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 MEIKINA0A087WXM9 373 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 NPIPA5A0A0B4J1W7 369 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 LINC00862A6NCI5 91 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ELOA3DA6NLF2 546 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SNRPGP15A8MWD9 76 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 NPIPA7E9PJI5 369 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 AIPO00170 330 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 TNFSF13O75888 250 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 RENP00797 406 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 CD14P08571 375 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 NPIPA8P0DM63 369 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 CD99P14209 185 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 PRKCAP17252 672 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 PSMB1P20618 241 aaKnown RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ACVR1BP36896 505 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 CCR4P51679 360 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 RASGEF1BQ0VAM2 473 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms