RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZNF582Q96NG8 517 aaPredicted RBP12.73□□□□□ -0.37
COL9A1-204ENST00000370496 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 SLCO1C1Q9NYB5 712 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 TAAR3PQ9P1P4 343 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 ARFGEF3Q5TH69 2177 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 OTOGQ6ZRI0 2925 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 PRRC2AP48634 2157 aaKnown RBP12.73□□□□□ -0.37
COL9A1-204ENST00000370496 LOC100130705A0A1B0GUX0 176 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 TMEM129A0AVI4 362 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 NDUFS7O75251 213 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 CLPTM1O96005 669 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 MT-ND5P03915 603 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 LCATP04180 440 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 ADRA2AP08913 450 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 H2BFMP0C1H6 154 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 HTR1FP30939 366 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 CX3CR1P49238 355 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 PRKXP51817 358 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 SLC34A1Q06495 639 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 POU4F2Q12837 409 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 KRTAP27-1Q3LI81 207 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 SHEQ5VZ18 495 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 MBNL2Q5VZF2 373 aaKnown RBP12.72□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF283Q8N7M2 679 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 OR51G2Q8NGK0 314 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 CYGBQ8WWM9 190 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 SORCS2Q96PQ0 1159 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 AMELYQ99218 206 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 DOK1Q99704 481 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 KCNJ15Q99712 375 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 TPK1Q9H3S4 243 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 POFUT1Q9H488 388 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 ADGRL4Q9HBW9 690 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 FAM118AQ9NWS6 357 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 PTTG3PQ9NZH4 202 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 WARS2Q9UGM6 360 aaKnown RBP12.72□□□□□ -0.37
COL9A1-204ENST00000370496 KLHDC2Q9Y2U9 406 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 TMEM14AQ9Y6G1 99 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 ARID1AO14497 2285 aa12.72□□□□□ -0.37
COL9A1-204ENST00000370496 CREBBPQ92793 2442 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 PLSCR5A0PG75 271 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 TIMM8AO60220 97 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-204ENST00000370496 MPZL2O60487 215 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 ANXA2P07355 339 aaKnown RBP12.71□□□□□ -0.37
COL9A1-204ENST00000370496 TUBG1P23258 451 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 ATP6V1E1P36543 226 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 SNRPGP62308 76 aaKnown RBP12.71□□□□□ -0.37
COL9A1-204ENST00000370496 MALLQ13021 153 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 MOGQ16653 247 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 MEDAGQ5VYS4 303 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 DRAM2Q6UX65 266 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-204ENST00000370496 SLC35F2Q8IXU6 374 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 C1QTNF5Q9BXJ0 243 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 TTTY10Q9BZA0 68 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 TUBG2Q9NRH3 451 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 NKX1-2Q9UD57 310 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-204ENST00000370496 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL9A1-204ENST00000370496 STARD10Q9Y365 291 aa12.71□□□□□ -0.37
COL9A1-204ENST00000370496 RTTNQ86VV8 2226 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 SNTNA6NMZ2 147 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 E9PQ18 207 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 SSX4O60224 188 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 IGHV3-13P01766 116 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 APOC1P02654 83 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 SLC2A1P11166 492 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 NAT2P11245 290 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 OTX1P32242 354 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-204ENST00000370496 OPRL1P41146 370 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 EFNA4P52798 201 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 TESK1Q15569 626 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 RSPO1Q2MKA7 263 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-204ENST00000370496 ZMAT1Q5H9K5 638 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 KCTD18Q6PI47 426 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-204ENST00000370496 LRRN1Q6UXK5 716 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 KRT77Q7Z794 578 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 ENTHD1Q8IYW4 607 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 UBE2FQ969M7 185 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 MNTQ99583 582 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 HAO2Q9NYQ3 351 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 IKZF2Q9UKS7 526 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 N6AMT1Q9Y5N5 214 aa12.7□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF670-ZNF695F2Z2N8 137 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 DLGAP1O14490 977 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 PHYHO14832 338 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 SLC16A6O15403 523 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 TBX1O43435 398 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 ENTPD6O75354 484 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 APOL3O95236 402 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 SBK2P0C263 348 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 ALOX5APP20292 161 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 MTNR1AP48039 350 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms