RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PNRC2Q9NPJ4 139 aaKnown RBP11.85□□□□□ -0.51
SSR4-202ENST00000370085 DNAJC27Q9NZQ0 273 aa11.85□□□□□ -0.51
SSR4-202ENST00000370085 NKX1-2Q9UD57 310 aaPredicted RBP11.85□□□□□ -0.51
SSR4-202ENST00000370085 CGGBP1Q9UFW8 167 aaPredicted RBP11.85□□□□□ -0.51
SSR4-202ENST00000370085 ITGB1BP2Q9UKP3 347 aa11.85□□□□□ -0.51
SSR4-202ENST00000370085 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
SSR4-202ENST00000370085 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 PLSCR5A0PG75 271 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ZNF670-ZNF695F2Z2N8 137 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 H0YAE9 185 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 H0YJX3 145 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 H7C417 338 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 M0R233 179 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 OVOL3O00110 214 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 CD8AP01732 235 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 LCATP04180 440 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 DBHP09172 617 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ACSM4P0C7M7 580 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ZNF250P15622 560 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 PAX1P15863 534 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 LIPAP38571 399 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 MTNR1AP48039 350 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 PPOXP50336 477 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ART1P52961 327 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ATP5J2P56134 94 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 IL5RAQ01344 420 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 SWI5Q1ZZU3 235 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ZMAT1Q5H9K5 638 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 MBNL2Q5VZF2 373 aaKnown RBP11.84□□□□□ -0.51
SSR4-202ENST00000370085 C11orf71Q6IPW1 123 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 DEGS2Q6QHC5 323 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 BCDIN3DQ7Z5W3 292 aaKnown RBP11.84□□□□□ -0.51
SSR4-202ENST00000370085 KRT77Q7Z794 578 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 SLC35F2Q8IXU6 374 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ZNF283Q8N7M2 679 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 OR51G2Q8NGK0 314 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 SLC25A40Q8TBP6 338 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 SLC7A6Q92536 515 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 MRPL48Q96GC5 212 aaKnown RBP11.84□□□□□ -0.51
SSR4-202ENST00000370085 SYT3Q9BQG1 590 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 C1QTNF5Q9BXJ0 243 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 MRPL37Q9BZE1 423 aaKnown RBP11.84□□□□□ -0.51
SSR4-202ENST00000370085 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 CYSLTR2Q9NS75 346 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 ZNF701Q9NV72 531 aaPredicted RBP11.84□□□□□ -0.51
SSR4-202ENST00000370085 USF3Q68DE3 2245 aa11.84□□□□□ -0.51
SSR4-202ENST00000370085 MAP1AP78559 2803 aaPredicted RBP11.83□□□□□ -0.52
SSR4-202ENST00000370085 E9PQ18 207 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 ZNF254O75437 659 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 SBK2P0C263 348 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 SELEP16581 610 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 ALOX5APP20292 161 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 OTX1P32242 354 aaPredicted RBP11.83□□□□□ -0.52
SSR4-202ENST00000370085 CAPGP40121 348 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 PTH2RP49190 550 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 ACTC1P68032 377 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 ACTA1P68133 377 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 SPATA46Q5T0L3 261 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 SHEQ5VZ18 495 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 RFPL4BQ6ZWI9 263 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 SPATC1Q76KD6 591 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 ENTHD1Q8IYW4 607 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
SSR4-202ENST00000370085 IGFBPL1Q8WX77 278 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 PERPQ96FX8 193 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
SSR4-202ENST00000370085 VRK1Q99986 396 aaPredicted RBP11.83□□□□□ -0.52
SSR4-202ENST00000370085 ADI1Q9BV57 179 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 OR2J1Q9GZK6 312 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 OPA3Q9H6K4 179 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 FZR1Q9UM11 496 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 HSPE1-MOB4S4R3N1 261 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 CSMD2Q7Z408 3487 aa11.83□□□□□ -0.52
SSR4-202ENST00000370085 ARFGEF3Q5TH69 2177 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 IGLV3-9A0A075B6K5 115 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 TIMM8AO60220 97 aaPredicted RBP11.82□□□□□ -0.52
SSR4-202ENST00000370085 ENTPD6O75354 484 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 ATP6V1G2O95670 118 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 NGFP01138 241 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 IGHV3-13P01766 116 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 ANXA2P07355 339 aaKnown RBP11.82□□□□□ -0.52
SSR4-202ENST00000370085 RAC2P15153 192 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 CDKN1AP38936 164 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 OPRL1P41146 370 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 HSPA13P48723 471 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 CX3CR1P49238 355 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 PRKXP51817 358 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 RIDAP52758 137 aaKnown RBP11.82□□□□□ -0.52
SSR4-202ENST00000370085 MST1LQ2TV78 715 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 KRTAP27-1Q3LI81 207 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 ZNF691Q5VV52 312 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 C8orf59Q8N0T1 100 aaPredicted RBP11.82□□□□□ -0.52
SSR4-202ENST00000370085 OR52H1Q8NGJ2 320 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 OR10S1Q8NGN2 331 aa11.82□□□□□ -0.52
SSR4-202ENST00000370085 DOK1Q99704 481 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms