RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PPP1R3BQ86XI6 285 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 LURAP1LQ8IV03 231 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ZNF676Q8N7Q3 588 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ZNF614Q8N883 585 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ELOA3Q8NG57 546 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 OR51L1Q8NGJ5 315 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 OR51S1Q8NGJ8 323 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ZPLD1Q8TCW7 415 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 CT55Q8WUE5 264 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 TMEM106AQ96A25 262 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 FAM3DQ96BQ1 224 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 Q96M85 177 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 ZNF587Q96SQ5 575 aaPredicted RBP10.31□□□□□ -0.76
USF1-201ENST00000368019 INTS14Q96SY0 518 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 NPAS1Q99742 590 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 AKIRIN1Q9H9L7 192 aaPredicted RBP10.31□□□□□ -0.76
USF1-201ENST00000368019 FKRPQ9H9S5 495 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 MMP25Q9NPA2 562 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 TMEM138Q9NPI0 162 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 MRPS33Q9Y291 106 aaKnown RBP10.31□□□□□ -0.76
USF1-201ENST00000368019 CACNA1DQ01668 2161 aa10.31□□□□□ -0.76
USF1-201ENST00000368019 FER1L5A0AVI2 2057 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 CDC14CA4D256 554 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 IDSB3KWA1 339 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 DISC1C4P0D8 188 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 LDLRAD4O15165 306 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 RLN2P04090 185 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 ZNF735P0CB33 412 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 TMIGD3P0DMS9 266 aaPredicted RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 TBPP20226 339 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 STARP49675 285 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 CTXN1P60606 82 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 SNRPNP63162 240 aaKnown RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 S100A12P80511 92 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 NAAAQ02083 359 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 ROM1Q03395 351 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 FUT7Q11130 342 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 SERTAD2Q14140 314 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 C2orf68Q2NKX9 166 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 KLHL26Q53HC5 615 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 PAN3Q58A45 887 aaKnown RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 TEX30Q5JUR7 227 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 DCAF12L2Q5VW00 463 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 JMJD6Q6NYC1 403 aaPredicted RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 ZNF546Q86UE3 836 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 BEST3Q8N1M1 668 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 CSNK1A1LQ8N752 337 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 C7orf57Q8NEG2 295 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 OR10K1Q8NGX5 313 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 OTOSQ8NHW6 89 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 STOML3Q8TAV4 291 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 RNF128Q8TEB7 428 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 FOXRED1Q96CU9 486 aaPredicted RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 C1QTNF6Q9BXI9 259 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 GPR87Q9BY21 358 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 PDE7BQ9NP56 450 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 PRODH2Q9UF12 536 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 KLHDC2Q9Y2U9 406 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 MRPS2Q9Y399 296 aaKnown RBP10.3□□□□□ -0.76
USF1-201ENST00000368019 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
USF1-201ENST00000368019 SCN3AQ9NY46 2000 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 TRAV18A0A075B6X5 111 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 NBPF19A0A087WUL8 3843 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 LOC390937A0A1W2PQ73 354 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 OR14I1A6ND48 311 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 EIF1AYO14602 144 aaKnown RBP10.29□□□□□ -0.76
USF1-201ENST00000368019 FGF16O43320 207 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 SIX6O95475 246 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 CD2P06729 351 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 RNH1P13489 461 aaKnown RBP10.29□□□□□ -0.76
USF1-201ENST00000368019 IGFBP3P17936 291 aaPredicted RBP10.29□□□□□ -0.76
USF1-201ENST00000368019 MST1P26927 711 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 TACR3P29371 465 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 KIR3DL2P43630 455 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 EIF1AXP47813 144 aaKnown RBP10.29□□□□□ -0.76
USF1-201ENST00000368019 SLC6A8P48029 635 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 SOX2P48431 317 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
USF1-201ENST00000368019 GSK3AP49840 483 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 KCNAB1Q14722 419 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 SLC17A1Q14916 467 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 PNLIPRP3Q17RR3 467 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 C2orf76Q3KRA6 126 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 C1orf100Q5SVJ3 147 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 RAB12Q6IQ22 244 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 NPSR1Q6W5P4 371 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 ADGRE4PQ86SQ3 457 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 KMT5CQ86Y97 462 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 D2HGDHQ8N465 521 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 ARHGEF39Q8N4T4 335 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 NKAIN3Q8N8D7 197 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 ZNF511Q8NB15 262 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 STEAP2Q8NFT2 490 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 OR51D1Q8NGF3 324 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 MARC2Q969Z3 335 aa10.29□□□□□ -0.76
USF1-201ENST00000368019 SLC25A28Q96A46 364 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 725.2 ms