RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 ART3Q13508 389 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 ZNF726P1Q15940 193 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 REEP3Q6NUK4 255 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 SPINT4Q6UDR6 99 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 CASP12Q6UXS9 341 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 Q6ZSR3 168 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 SLC16A14Q7RTX9 510 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 SLC22A9Q8IVM8 553 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 FAM71AQ8IYT1 594 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 GPR26Q8NDV2 337 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 OR52E2Q8NGJ4 325 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 GGTLC1Q9BX51 225 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 OR51M1Q9H341 326 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 TMEM27Q9HBJ8 222 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 EXOSC4Q9NPD3 245 aaKnown RBP1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 RHBDL2Q9NX52 303 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 CCDC59Q9P031 241 aaKnown RBP1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 HIVEP2P31629 2446 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 SCN4AP35499 1836 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 SDK2Q58EX2 2172 aa1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.72□□□□□ -2.13
RNU4-1-201ENST00000363925 RAD51CO43502 376 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 RNF13O43567 381 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 PAHP00439 452 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 CTSLP07711 333 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 LOXP28300 417 aaPredicted RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 CD34P28906 385 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 RBX1P62877 108 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 MRPL23Q16540 153 aaKnown RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 RNASE13Q5GAN3 156 aaKnown RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 XKR7Q5GH72 579 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 SPIN3Q5JUX0 258 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 UBE2UQ5VVX9 321 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 CERS6Q6ZMG9 384 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 CDR2LQ86X02 465 aaPredicted RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 IQCKQ8N0W5 287 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 ZNF645Q8N7E2 425 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 OR4A4PQ8NGN8 299 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 OR5M1Q8NGP8 315 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 OR1J4Q8NGS1 313 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 DUS3LQ96G46 650 aaKnown RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 TPD52L3Q96J77 140 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 MARVELD1Q9BSK0 173 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 NUP58Q9BVL2 599 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 FRMD8P1Q9BZ68 369 aaPredicted RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 BEX1Q9HBH7 125 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 RETNQ9HD89 108 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 DHCR7Q9UBM7 475 aaKnown RBP1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 ASB3Q9Y575 518 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 PALLDQ8WX93 1383 aa1.71□□□□□ -2.14
RNU4-1-201ENST00000363925 ATAD2BQ9ULI0 1458 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 BAZ2AQ9UIF9 1905 aaKnown RBP1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 IGHV3-49A0A0A0MS15 119 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 IGHV1-69DA0A0B4J2H0 117 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 XKRY2A2RUG3 117 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 OR5H1A6NKK0 313 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 KRBOX1C9JBD0 128 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 AP3B1O00203 1094 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 SIRPB1O00241 398 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 MANBAO00462 879 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 PLPP1O14494 284 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 CYB5R3P00387 301 aaPredicted RBP1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 PRLHRP49683 370 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 TRAM2Q15035 370 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 NCF4Q15080 339 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 CEP55Q53EZ4 464 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 HSP90AB3PQ58FF7 597 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 TPTE2P1Q5T6R2 138 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 C22orf42Q6IC83 251 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 TTC23LQ6PF05 361 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 MBOAT2Q6ZWT7 520 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 TAS2R42Q7RTR8 314 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 APCDD1LQ8NCL9 501 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 ZNF680Q8NEM1 530 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 OR5T1Q8NG75 326 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 OR6Q1Q8NGQ2 317 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 LYPD6BQ8NI32 183 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 NUBPLQ8TB37 319 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 ZNF317Q96PQ6 595 aaPredicted RBP1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 RHOXF2Q9BQY4 288 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 MED4Q9NPJ6 270 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 C8orf17Q9NRJ1 99 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 AGPAT4Q9NRZ5 378 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 EXTL2Q9UBQ6 330 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 ZNF230Q9UIE0 474 aaPredicted RBP1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 SHROOM3Q8TF72 1996 aa1.7□□□□□ -2.14
RNU4-1-201ENST00000363925 IGKV1-8A0A0C4DH67 115 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 CEACAM18A8MTB9 384 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 H7C1H1 209 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 EIF3HO15372 352 aaKnown RBP eCLIP1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 PLIN3O60664 434 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 CLDN11O75508 207 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 CNMDO75829 334 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 FLOT1O75955 427 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 IGHV3-11P01762 117 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 GTF2E2P29084 291 aaKnown RBP1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 RAB10P61026 200 aa1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 RPS11P62280 158 aaKnown RBP eCLIP1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 PPIDQ08752 370 aaKnown RBP1.69□□□□□ -2.14
RNU4-1-201ENST00000363925 TEX30Q5JUR7 227 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms