RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 GALR1P47211 349 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 SYPL1Q16563 259 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 ARRDC2Q8TBH0 407 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 TMEM37Q8WXS4 190 aa12.11□□□□□ -0.47
SRGAP3-201ENST00000360413 A0A1B0GUH1 482 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 TCN2P20062 427 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 B2MP61769 119 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 MFSD4AQ8N468 514 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 OR52N1Q8NH53 320 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 DTD2Q96FN9 168 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 NMNAT3Q96T66 252 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 ARPC3O15145 178 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 BCAT2O15382 392 aaPredicted RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 TIMP1P01033 207 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 CLPPQ16740 277 aaPredicted RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 TBPL2Q6SJ96 375 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 ELOVL1Q9BW60 279 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 CDCP1Q9H5V8 836 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 FBXO34Q9NWN3 711 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 H7C1C5 153 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 ACOT8O14734 319 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 ANKRD34CP0C6C1 535 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 RAB38P57729 211 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 C1orf61Q13536 156 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 OR1A1Q9P1Q5 309 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 GP2P55259 537 aaKnown RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 NANOGP1Q8N7R0 232 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 NIPSNAP1Q9BPW8 284 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 GSX1Q9H4S2 264 aaPredicted RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 SLC38A5Q8WUX1 472 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 LMAN1LQ9HAT1 526 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 LRIT1Q9P2V4 623 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 SNRPGP15A8MWD9 76 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 AQP8O94778 261 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 CALCBP10092 127 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 AGBL4Q5VU57 503 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 PHYHIPLQ96FC7 376 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
SRGAP3-201ENST00000360413 SMIM6P0DI80 62 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 CTSAP10619 480 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PITX1P78337 314 aaPredicted RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 CTU2Q2VPK5 515 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 UBE2FQ969M7 185 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 MYO16Q9Y6X6 1858 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 CSF3P09919 207 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 ALOX5APP20292 161 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 NHLH1Q02575 133 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 NHLH2Q02577 135 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 EXOSC7Q15024 291 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 ASB11Q8WXH4 323 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 P2RY10O00398 339 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PLA1AQ53H76 456 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 SPANXN5Q5MJ07 72 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 EIF4E3Q8N5X7 224 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2D3Q8NGH3 330 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 SPNP16150 400 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 C19orf47Q8N9M1 422 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PINX1Q96BK5 328 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 OR8B4Q96RC9 309 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 FLVCR2Q9UPI3 526 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2G2Q8NGZ5 317 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PPP1R1CQ8WVI7 109 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PLA2G12AQ9BZM1 189 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 NDUFB11Q9NX14 153 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 TLCD2A6NGC4 264 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 AP4M1O00189 453 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PPP6CO00743 305 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 ARRB2P32121 409 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 RGRP47804 291 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 FA2HQ7L5A8 372 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 ZDHHC5Q9C0B5 715 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 ECM29Q5VYK3 1845 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 B4GALT3O60512 393 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 GNB2P62879 340 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 PRR27Q6MZM9 219 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 EDAQ92838 391 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
SRGAP3-201ENST00000360413 A0A1B0GTQ1 180 aa12.08□□□□□ -0.47
SRGAP3-201ENST00000360413 TCF21O43680 179 aa12.08□□□□□ -0.47
SRGAP3-201ENST00000360413 C1orf105O95561 183 aa12.08□□□□□ -0.47
SRGAP3-201ENST00000360413 PRLHRP49683 370 aa12.08□□□□□ -0.47
SRGAP3-201ENST00000360413 RNASEKQ6P5S7 137 aaKnown RBP12.08□□□□□ -0.47
SRGAP3-201ENST00000360413 ISL2Q96A47 359 aa12.08□□□□□ -0.47
SRGAP3-201ENST00000360413 DUS3LQ96G46 650 aaKnown RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms