RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MBP02144 154 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 C1QBP02746 253 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 P04436 131 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 HLA-DPB1P04440 258 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ADRB1P08588 477 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 RRASP10301 218 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ANOS1P23352 680 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SLC25A1P53007 311 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 RPS11P62280 158 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ACTC1P68032 377 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ACTA1P68133 377 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SRYQ05066 204 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 MFGE8Q08431 387 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-202ENST00000359366 POU4F2Q12837 409 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 DYRK1AQ13627 763 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 CDK5R1Q15078 307 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 CARTPTQ16568 116 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 C4orf48Q5BLP8 95 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 DCAF10Q5QP82 559 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 GPR139Q6DWJ6 353 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 DMKNQ6E0U4 476 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-202ENST00000359366 CD200R1LQ6Q8B3 271 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SLC16A9Q7RTY1 509 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 CDC20BQ86Y33 519 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF248Q8NDW4 579 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 OR14L1PQ8NHC6 308 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 MFSD8Q8NHS3 518 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ST8SIA2Q92186 375 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 KLHL15Q96M94 604 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SDHCQ99643 169 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-202ENST00000359366 MED18Q9BUE0 208 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SRXN1Q9BYN0 137 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 NXF2Q9GZY0 626 aaKnown RBP4.53□□□□□ -1.68
ATXN3-202ENST00000359366 OPA3Q9H6K4 179 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SEC61A2Q9H9S3 476 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 ELOVL3Q9HB03 270 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 SH2D2AQ9NP31 389 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 MED9Q9NWA0 146 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 PTTG3PQ9NZH4 202 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 LRFN1Q9P244 771 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 COPZ2Q9P299 210 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 GSTK1Q9Y2Q3 226 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 AK6Q9Y3D8 172 aaKnown RBP4.53□□□□□ -1.68
ATXN3-202ENST00000359366 CSAG2Q9Y5P2 127 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 RELNP78509 3460 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 NCOR2Q9Y618 2525 aa4.53□□□□□ -1.68
ATXN3-202ENST00000359366 KIAA1549Q9HCM3 1950 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 IGLV3-32A0A0A0MS00 114 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 A0A0J9YW62 118 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 A0A1W2PPL8 197 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 LRRC3CA6NJW4 275 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PRR33A8MZF0 331 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF208O43345 1280 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PLPP2O43688 288 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 UPK3AO75631 287 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SNAPC5O75971 98 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PNPP00491 289 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 IGF2P01344 180 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 IFNA7P01567 189 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ITGB2P05107 769 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SERPINA7P05543 415 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ACAA1P09110 424 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 APEHP13798 732 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SPNP16150 400 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ALOX5APP20292 161 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SDHBP21912 280 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 GDF1P27539 372 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 MSX1P28360 303 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 CYB561P49447 251 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 GZMKP49863 264 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SUMO3P55854 103 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 CLDN12P56749 244 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 EIF2B1Q14232 305 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 C3AR1Q16581 482 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 BAK1Q16611 211 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 RNASE12Q5GAN4 147 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DMRTC1Q5HYR2 192 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 SLC35D3Q5M8T2 416 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 RIPPLY2Q5TAB7 128 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 STEAP3Q658P3 488 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 GDPGP1Q6ZNW5 385 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 C1orf122Q6ZSJ8 110 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ESPNLQ6ZVH7 1005 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 OVCH2Q7RTZ1 564 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 PRSS35Q8N3Z0 413 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF433Q8N7K0 673 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 DNAAF1Q8NEP3 725 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 FAM216AQ8WUB2 273 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ROBO4Q8WZ75 1007 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 RBPMSQ93062 196 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ZNF385AQ96PM9 386 aaKnown RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ATF6BQ99941 703 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 LRFN3Q9BTN0 628 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 COL25A1Q9BXS0 654 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ISYNA1Q9NPH2 558 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 NOX4Q9NPH5 578 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 INPP5EQ9NRR6 644 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 MCUBQ9NWR8 336 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 ALKBH4Q9NXW9 302 aa4.52□□□□□ -1.69
ATXN3-202ENST00000359366 FRRS1LQ9P0K9 344 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms