RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 ATG12O94817 140 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 DDAH2O95865 285 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 SERTAD2Q14140 314 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 ZNF260Q3ZCT1 412 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 PLEKHN1Q494U1 663 aaPredicted RBP21.5■■□□□ 1.03
DDX42-201ENST00000359353 LDLRAD3Q86YD5 345 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 LINC00518Q8N0U6 118 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 ELP5Q8TE02 316 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 ZNF721Q8TF20 911 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 SLC46A1Q96NT5 459 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 DUSP15Q9H1R2 295 aaPredicted RBP21.5■■□□□ 1.03
DDX42-201ENST00000359353 CSAG2Q9Y5P2 127 aa21.5■■□□□ 1.03
DDX42-201ENST00000359353 ZNF823P16415 610 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 RIPPLY1Q0D2K3 151 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 INPP5JQ15735 1006 aaPredicted RBP21.49■■□□□ 1.03
DDX42-201ENST00000359353 TMEM200AQ86VY9 491 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 OR13C9Q8NGT0 318 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 OR10Z1Q8NGY1 313 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 DCUN1D4Q92564 292 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 ARL5BQ96KC2 179 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 SOX7Q9BT81 388 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 SHISA8B8ZZ34 492 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 TMEM150CB9EJG8 249 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 PLPP3O14495 311 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 NDUFA2O43678 99 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 SERPINF1P36955 418 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 COX15Q7KZN9 410 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 THAP3Q8WTV1 239 aaPredicted RBP21.49■■□□□ 1.03
DDX42-201ENST00000359353 TMED6Q8WW62 240 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 ADAT3Q96EY9 351 aaPredicted RBP21.49■■□□□ 1.03
DDX42-201ENST00000359353 TCTN2Q96GX1 697 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 NUDT22Q9BRQ3 303 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 KCNK7Q9Y2U2 307 aa21.49■■□□□ 1.03
DDX42-201ENST00000359353 FRG2CA6NGY1 282 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 MPTX1A8MV57 137 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 ZNF208O43345 1280 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 OPN1LWP04000 364 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 ZNF345Q14585 488 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 ARMC10Q8N2F6 343 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 AQP3Q92482 292 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 EDAQ92838 391 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 PHB2Q99623 299 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 SLC6A15Q9H2J7 730 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 WBP1LQ9NX94 342 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 PRAMEF26H0Y7S4 382 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 SRSF10O75494 262 aaKnown RBP21.48■■□□□ 1.03
DDX42-201ENST00000359353 SLC25A4P12235 298 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 PABPC1L2AQ5JQF8 200 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 HLA-DQA1Q5Y7H0 255 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 RRNAD1Q96FB5 475 aaKnown RBP21.48■■□□□ 1.03
DDX42-201ENST00000359353 PRRT1Q99946 306 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 VSX1Q9NZR4 365 aaPredicted RBP21.48■■□□□ 1.03
DDX42-201ENST00000359353 PURGQ9UJV8 347 aaKnown RBP21.48■■□□□ 1.03
DDX42-201ENST00000359353 FER1L5A0AVI2 2057 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 HSPB2A8KAH6 182 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 CAPZBP47756 277 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 EBPQ15125 230 aaKnown RBP21.48■■□□□ 1.03
DDX42-201ENST00000359353 HSPB2Q16082 182 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 MITD1Q8WV92 249 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 CPNE2Q96FN4 548 aaPredicted RBP21.48■■□□□ 1.03
DDX42-201ENST00000359353 DNTTIP1Q9H147 329 aa21.48■■□□□ 1.03
DDX42-201ENST00000359353 IGHV3-20A0A0C4DH32 117 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 SLC2A1P11166 492 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 FSTP19883 344 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 PGCP20142 388 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 ANOS1P23352 680 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 GABRA4P48169 554 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 SLC9A3R2Q15599 337 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 C1orf189Q5VU69 101 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.47■■□□□ 1.03
DDX42-201ENST00000359353 OR5AP2Q8NGF4 316 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 FOXRED1Q96CU9 486 aaPredicted RBP21.47■■□□□ 1.03
DDX42-201ENST00000359353 FBRSQ9HAH7 460 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 RHBDD3Q9Y3P4 386 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 HS3ST3A1Q9Y663 406 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 TMEM218A2RU14 115 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 ADAP1O75689 374 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 IGKV3-11P04433 115 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 VSIG8P0DPA2 414 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 SLC6A8P48029 635 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 STK11Q15831 433 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 THRSPQ92748 146 aa21.47■■□□□ 1.03
DDX42-201ENST00000359353 CHMP1AQ9HD42 196 aaPredicted RBP21.47■■□□□ 1.03
DDX42-201ENST00000359353 A0A1W2PP11 408 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 METTL21EPA6NDL7 271 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 EFSO43281 561 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 DXOO77932 396 aaKnown RBP21.46■■□□□ 1.03
DDX42-201ENST00000359353 ABCD3P28288 659 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 HAGHLQ6PII5 290 aaPredicted RBP21.46■■□□□ 1.03
DDX42-201ENST00000359353 GTPBP8Q8N3Z3 284 aaPredicted RBP21.46■■□□□ 1.03
DDX42-201ENST00000359353 SLC26A10Q8NG04 563 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 ST7LQ8TDW4 575 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 OR2S2Q9NQN1 319 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 VDAC3Q9Y277 283 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 PRELID3BQ9Y3B1 194 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 MSGN1A6NI15 193 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 ZNF217O75362 1048 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 H2BFMP0C1H6 154 aa21.46■■□□□ 1.03
DDX42-201ENST00000359353 POU3F1Q03052 451 aaPredicted RBP21.46■■□□□ 1.03
DDX42-201ENST00000359353 NSDHLQ15738 373 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms