RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 IGKV3D-11A0A0A0MRZ8 115 aa10□□□□□ -0.81
SSU72-202ENST00000359060 FADS1O60427 444 aa10□□□□□ -0.81
SSU72-202ENST00000359060 DXOO77932 396 aaKnown RBP10□□□□□ -0.81
SSU72-202ENST00000359060 GUSBP08236 651 aa10□□□□□ -0.81
SSU72-202ENST00000359060 GNB3P16520 340 aa10□□□□□ -0.81
SSU72-202ENST00000359060 GABRR1P24046 479 aa10□□□□□ -0.81
SSU72-202ENST00000359060 GABRA4P48169 554 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PER3P56645 1201 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PLGLB1Q02325 96 aa10□□□□□ -0.81
SSU72-202ENST00000359060 ELP2Q6IA86 826 aa10□□□□□ -0.81
SSU72-202ENST00000359060 TEX261Q6UWH6 196 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PRSS42Q7Z5A4 293 aa10□□□□□ -0.81
SSU72-202ENST00000359060 FAM71CQ8NEG0 241 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OR10K1Q8NGX5 313 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PIGTQ969N2 578 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PHB2Q99623 299 aa10□□□□□ -0.81
SSU72-202ENST00000359060 CLDN16Q9Y5I7 305 aa10□□□□□ -0.81
SSU72-202ENST00000359060 U3KQ87 197 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PATE3B3GLJ2 98 aa10□□□□□ -0.81
SSU72-202ENST00000359060 RGS11O94810 467 aa10□□□□□ -0.81
SSU72-202ENST00000359060 GIPP09681 153 aaPredicted RBP10□□□□□ -0.81
SSU72-202ENST00000359060 NAGAP17050 411 aa10□□□□□ -0.81
SSU72-202ENST00000359060 SUMO3P55854 103 aaPredicted RBP10□□□□□ -0.81
SSU72-202ENST00000359060 RAG2P55895 527 aa10□□□□□ -0.81
SSU72-202ENST00000359060 PLA2G7Q13093 441 aa10□□□□□ -0.81
SSU72-202ENST00000359060 ESCO2Q56NI9 601 aa10□□□□□ -0.81
SSU72-202ENST00000359060 EXOSC6Q5RKV6 272 aaKnown RBP10□□□□□ -0.81
SSU72-202ENST00000359060 OR52W1Q6IF63 320 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OR2AK2Q8NG84 335 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OR4K15Q8NH41 348 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OIT3Q8WWZ8 545 aa10□□□□□ -0.81
SSU72-202ENST00000359060 B3GNT2Q9NY97 397 aa10□□□□□ -0.81
SSU72-202ENST00000359060 NXT1Q9UKK6 140 aaKnown RBP10□□□□□ -0.81
SSU72-202ENST00000359060 TCN2P20062 427 aa10□□□□□ -0.81
SSU72-202ENST00000359060 ZNF121P58317 390 aaPredicted RBP10□□□□□ -0.81
SSU72-202ENST00000359060 DEFA5Q01523 94 aa10□□□□□ -0.81
SSU72-202ENST00000359060 FHL1Q13642 323 aa10□□□□□ -0.81
SSU72-202ENST00000359060 SPERTQ8NA61 448 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OR11G2Q8NGC1 345 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OR52N4Q8NGI2 321 aa10□□□□□ -0.81
SSU72-202ENST00000359060 OR4D10Q8NGI6 311 aa10□□□□□ -0.81
SSU72-202ENST00000359060 ASB10Q8WXI3 467 aa10□□□□□ -0.81
SSU72-202ENST00000359060 MAP6Q96JE9 813 aa10□□□□□ -0.81
SSU72-202ENST00000359060 ZNF285Q96NJ3 590 aa10□□□□□ -0.81
SSU72-202ENST00000359060 RASL10BQ96S79 203 aa10□□□□□ -0.81
SSU72-202ENST00000359060 SMOC1Q9H4F8 434 aa10□□□□□ -0.81
SSU72-202ENST00000359060 FBXO4Q9UKT5 387 aa10□□□□□ -0.81
SSU72-202ENST00000359060 VCANP13611 3396 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 IGHV5-10-1A0A0J9YXX1 117 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 STK17BO94768 372 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 CRYZL1O95825 349 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SCGB1D2O95969 90 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 FCGR2AP12318 317 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 CCL4P13236 92 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 S100A11P31949 105 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SCRN3Q0VDG4 424 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SMCO1Q147U7 214 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SLC9A3R2Q15599 337 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SLC25A43Q8WUT9 341 aaPredicted RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 PHF3Q92576 2039 aaKnown RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 ICMTO60725 284 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 TGM6O95932 706 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 IGHV3-9P01782 118 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 ACSM4P0C7M7 580 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 GDF1P27539 372 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 AGTR1P30556 359 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 LRRC75AQ8NAA5 344 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SLC26A10Q8NG04 563 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 NUBPLQ8TB37 319 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SPTSSAQ969W0 71 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SLC25A21Q9BQT8 299 aaPredicted RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 GSX2Q9BZM3 304 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 AKIRIN1Q9H9L7 192 aaPredicted RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 GLTPQ9NZD2 209 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 C14orf166Q9Y224 244 aaKnown RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 IGLV1-36A0A0B4J1U3 117 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 TRBV5-5A0A0J9YX44 114 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 LIPT2A6NK58 231 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 TO15178 435 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 LMX1BO60663 402 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 MTRF1O75570 445 aaKnown RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 FARS2O95363 451 aaKnown RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 CER1O95813 267 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SERPINA5P05154 406 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 CD1AP06126 327 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 TPOP07202 933 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SULT1A3P0DMM9 295 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SULT1A4P0DMN0 295 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 ATF4P18848 351 aaPredicted RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 BLVRBP30043 206 aaPredicted RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 CASRP41180 1078 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SEC61A1P61619 476 aaKnown RBP9.99□□□□□ -0.81
SSU72-202ENST00000359060 TMEM255AQ5JRV8 349 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 ALKBH2Q6NS38 261 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 PDZD9Q8IXQ8 264 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 OXGR1Q96P68 337 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 SCGB3A2Q96PL1 93 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 PADI1Q9ULC6 663 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 PCDHGA5Q9Y5G8 931 aa9.99□□□□□ -0.81
SSU72-202ENST00000359060 CELA2AP08217 269 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms