RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RAB3CQ96E17 227 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 VRK1Q99986 396 aaPredicted RBP11.05□□□□□ -0.64
COL20A1-201ENST00000358894 VN1R1Q9GZP7 353 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 IGHV4-34P06331 123 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 LPLP06858 475 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 JMJD7P0C870 316 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 CTLA4P16410 223 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 ACHEP22303 614 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 RAB13P51153 203 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 SLC25A1P53007 311 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 PNLIPRP2P54317 469 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 NANOS3P60323 173 aaKnown RBP11.05□□□□□ -0.64
COL20A1-201ENST00000358894 PLGLB1Q02325 96 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 SLC22A24Q8N4F4 322 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 SLAMF6Q96DU3 332 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 MVB12AQ96EY5 273 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 ZC3HAV1LQ96H79 300 aaKnown RBP11.05□□□□□ -0.64
COL20A1-201ENST00000358894 NECAB3Q96P71 396 aaPredicted RBP11.05□□□□□ -0.64
COL20A1-201ENST00000358894 ULBP2Q9BZM5 246 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 ZNF442Q9H7R0 627 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 ST6GALNAC2Q9UJ37 374 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 FOXJ3Q9UPW0 622 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 KCNIP3Q9Y2W7 256 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 DNAJC13O75165 2243 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 F10P00742 488 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 SRFP11831 508 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 SNRPEP62304 92 aaKnown RBP11.05□□□□□ -0.64
COL20A1-201ENST00000358894 PWWP2BQ6NUJ5 590 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 C9orf62Q8N4C0 152 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 ZNF565Q8N9K5 539 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 OR11H7Q8NGC8 314 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 OR51A4Q8NGJ6 313 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 MARC2Q969Z3 335 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 S1PR5Q9H228 398 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 FRRS1LQ9P0K9 344 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 LRP12Q9Y561 859 aa11.05□□□□□ -0.64
COL20A1-201ENST00000358894 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 XRCC3O43542 346 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 NUDT21O43809 227 aaKnown RBP11.04□□□□□ -0.64
COL20A1-201ENST00000358894 RBMXL2O75526 392 aaKnown RBP11.04□□□□□ -0.64
COL20A1-201ENST00000358894 STK17BO94768 372 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 IFNA4P05014 189 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 GAAP10253 952 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 ADH6P28332 368 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CAMLGP49069 296 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 RNF4P78317 190 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 GABREP78334 506 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 NR0B2Q15466 257 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL20A1-201ENST00000358894 MESTQ5EB52 335 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 GLIPR1L1Q6UWM5 242 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 SYT13Q7L8C5 426 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 SHISA5Q8N114 240 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 OR2AK2Q8NG84 335 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 STK35Q8TDR2 534 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CHST11Q9NPF2 352 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 SLC22A11Q9NSA0 550 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 TAS2R5Q9NYW4 299 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 EHFQ9NZC4 300 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 ZMIZ1Q9ULJ6 1067 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CACNA1DQ01668 2161 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 TNFSF12O43508 249 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 ALOX5APP20292 161 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 NME2P22392 152 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 RAB5CP51148 216 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CLDN6P56747 220 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 FOXF1Q12946 379 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 ZNF273Q14593 569 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 Q3ZCU0 254 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 Q5BKY6 102 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 ATG4DQ86TL0 474 aaPredicted RBP11.04□□□□□ -0.64
COL20A1-201ENST00000358894 OR4S1Q8NGB4 309 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 SLC25A21Q9BQT8 299 aaPredicted RBP11.04□□□□□ -0.64
COL20A1-201ENST00000358894 PHF7Q9BWX1 381 aaPredicted RBP11.04□□□□□ -0.64
COL20A1-201ENST00000358894 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 PARPBPQ9NWS1 579 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 TRAV8-7A0A075B6U6 113 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 SIGLEC6O43699 453 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 ICAM2P13598 275 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 OR1N1Q8NGS0 311 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 KCNJ16Q9NPI9 418 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 SLC7A11Q9UPY5 501 aa11.04□□□□□ -0.64
COL20A1-201ENST00000358894 DCTN6O00399 190 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 SLC17A2O00624 439 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 GLSO94925 669 aaPredicted RBP11.03□□□□□ -0.64
COL20A1-201ENST00000358894 PET100P0DJ07 73 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 TMIGD3P0DMS9 266 aaPredicted RBP11.03□□□□□ -0.64
COL20A1-201ENST00000358894 SMIM10L1P0DMW3 83 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 DPP4P27487 766 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 NPY4RP50391 375 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 RNF212Q495C1 297 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 PLA1AQ53H76 456 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 SMIM10Q96HG1 83 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 ABI3Q9P2A4 366 aa11.03□□□□□ -0.64
COL20A1-201ENST00000358894 LSM5Q9Y4Y9 91 aaKnown RBP11.03□□□□□ -0.64
COL20A1-201ENST00000358894 PUS1Q9Y606 427 aaKnown RBP eCLIP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms