RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SULT1C2O00338 296 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 TERTO14746 1132 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 WNT11O96014 354 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 CD63P08962 238 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 RPL4P36578 427 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 DCAF7P61962 342 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 Q0VFX4 171 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM166AQ6J272 317 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 JMJD6Q6NYC1 403 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 UQCC3Q6UW78 93 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM122BQ7Z309 247 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM220AQ7Z4H9 259 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 PM20D2Q8IYS1 436 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF441Q8N8Z8 693 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 RELL2Q8NC24 303 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 ELP5Q8TE02 316 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 CCDC107Q8WV48 283 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 MNTQ99583 582 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 GPR87Q9BY21 358 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 MYOTQ9UBF9 498 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 PSMD9O00233 223 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 OR2F2O95006 317 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 UTS2O95399 124 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 IL33O95760 270 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 TXNDC12O95881 172 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 ANXA2P07355 339 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 GTF2F2P13984 249 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 LIFP15018 202 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 SOX2P48431 317 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 EFNB2P52799 333 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 B2MP61769 119 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 ERVK-25P63136 954 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 OR2F1Q13607 317 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 CD226Q15762 336 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 CLVS2Q5SYC1 327 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 STEAP1BQ6NZ63 245 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 LPCAT3Q6P1A2 487 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 LEG1Q6P5S2 330 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 C12orf45Q8N5I9 185 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 BPIFCQ8NFQ6 507 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 NKX6-2Q9C056 277 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 WDR13Q9H1Z4 485 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 HPF1Q9NWY4 346 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 UPB1Q9UBR1 384 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 TNFSF18Q9UNG2 199 aa11.32□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM72A0PK05 275 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM212A6NML5 194 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 KDM4BO94953 1096 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 F10P00742 488 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CD3DP04234 171 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 OR4E1P0C645 316 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CD37P11049 281 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 HOXB1P14653 301 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CNR1P21554 472 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 PRSS3P35030 304 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 GUCA2AQ02747 115 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 FDX2Q6P4F2 183 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 MARCH3Q86UD3 253 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM229BQ8NBD8 167 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 OR5L2Q8NGL0 311 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 OR2G2Q8NGZ5 317 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 PHOSPHO1Q8TCT1 267 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 THRSPQ92748 146 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 SLC25A21Q9BQT8 299 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM138Q9NPI0 162 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 NDRG3Q9UGV2 375 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 HIF3AQ9Y2N7 669 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 MGAQ8IWI9 3026 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 PIEZO1Q92508 2521 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 IGKV1D-42A0A075B6H8 117 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 SCDO00767 359 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 BCL2L11O43521 198 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 TSPAN2O60636 221 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 RPP14O95059 124 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CSTAP01040 98 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 IGHEP01854 428 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CYC1P08574 325 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 HLA-GP17693 338 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 GRPRP30550 384 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 HOXA1P49639 335 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CCR4P51679 360 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 PSMD4P55036 377 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 EGR3Q06889 387 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CHAF1BQ13112 559 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 EXT1Q16394 746 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 GLT8D1Q68CQ7 371 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 GABRG1Q8N1C3 465 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 NUBPLQ8TB37 319 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 GPR148Q8TDV2 347 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 DUSP19Q8WTR2 217 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 ADAD1Q96M93 576 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 RASL10BQ96S79 203 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 SCNM1Q9BWG6 230 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms