RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 AQP8O94778 261 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 HPP00738 406 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 HPGDP15428 266 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 RPA2P15927 270 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 PRSS3P35030 304 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 KIR3DL2P43630 455 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 PSMD4P55036 377 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 FOXK1P85037 733 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 EGR3Q06889 387 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 MPPED2Q15777 294 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 HYAL4Q2M3T9 481 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 WDR38Q5JTN6 314 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF468Q5VIY5 522 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 C1QL3Q5VWW1 255 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 EIF4E3Q8N5X7 224 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 KTI12Q96EK9 354 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 RASL10BQ96S79 203 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 POFUT1Q9H488 388 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 EXO5Q9H790 373 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 ZC4H2Q9NQZ6 224 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 IL17BQ9UHF5 180 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF230Q9UIE0 474 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 KCNG2Q9UJ96 466 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 TRAV14DV4A0A0A6YYC5 116 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 SIGLEC5O15389 551 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 HCRTR2O43614 444 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 LRP3O75074 770 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 TXNDC12O95881 172 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 WNT11O96014 354 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 CFPP27918 469 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 OTX2P32243 289 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 SRSF6Q13247 344 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 LY6G6FQ5SQ64 297 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 WBP2NLQ6ICG8 309 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 STEAP1BQ6NZ63 245 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 TSEN15Q8WW01 171 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 PPP1R14AQ96A00 147 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 FAM3DQ96BQ1 224 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 MRPS24Q96EL2 167 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 C4orf45Q96LM5 186 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 DCBLD2Q96PD2 775 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 GLS2Q9UI32 602 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 NXT1Q9UKK6 140 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 CDV3Q9UKY7 258 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 FARSAQ9Y285 508 aaKnown RBP7.67□□□□□ -1.18
TRIM55-204ENST00000353317 SLC6A5Q9Y345 797 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 RFPL4AA6NLU0 287 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 RFPL4AL1F8VTS6 287 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ZFAND5O76080 213 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF432O94892 652 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ITGB2P05107 769 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 OR4E1P0C645 316 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 PNMTP11086 282 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ACHEP22303 614 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 FOLR3P41439 243 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 RASGEF1BQ0VAM2 473 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 EEF1A1P5Q5VTE0 462 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 LRFN4Q6PJG9 635 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 SLC35D2Q76EJ3 337 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 KRT77Q7Z794 578 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-204ENST00000353317 PM20D2Q8IYS1 436 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 PLPP7Q8NBV4 271 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 GPX8Q8TED1 209 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 RNF138Q8WVD3 245 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 SLC39A7Q92504 469 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 FOXN4Q96NZ1 517 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 INTS14Q96SY0 518 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 LAT2Q9GZY6 243 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 C1orf198Q9H425 327 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 SLC22A13Q9Y226 551 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 A0A1W2PQD3 144 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 SHISA8B8ZZ34 492 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 H3BUI4 141 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 CDC40O60508 579 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM55-204ENST00000353317 PNPP00491 289 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 APOC3P02656 99 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 MEP1BQ16820 701 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 FAM74A1Q5RGS3 127 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 POMZP3Q6PJE2 187 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 C17orf107Q6ZR85 190 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF546Q86UE3 836 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 GABRG1Q8N1C3 465 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 OR1J4Q8NGS1 313 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 OTOSQ8NHW6 89 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 GAL3ST1Q99999 423 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 DEFB126Q9BYW3 111 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 TBL1XR1Q9BZK7 514 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ADAM19Q9H013 955 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ALX4Q9H161 411 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ATG5Q9H1Y0 275 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 WDR13Q9H1Z4 485 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 ELOVL3Q9HB03 270 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 PROK2Q9HC23 129 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 C19orf25Q9UFG5 118 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-204ENST00000353317 SPTBN4Q9H254 2564 aa7.66□□□□□ -1.18
TRIM55-204ENST00000353317 LOC100289279A0A1B0GTE1 492 aa7.65□□□□□ -1.18
TRIM55-204ENST00000353317 SLC17A2O00624 439 aa7.65□□□□□ -1.18
TRIM55-204ENST00000353317 EIF4E2O60573 245 aaKnown RBP7.65□□□□□ -1.18
TRIM55-204ENST00000353317 TACR3P29371 465 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms