RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TM4SF5O14894 197 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 EEF1E1O43324 174 aaKnown RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 TRAPPC6AO75865 159 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 F10P00742 488 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 IGLV3-1P01715 115 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 MAS1P04201 325 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ANXA2P07355 339 aaKnown RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 SP1P08047 785 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ITGA5P08648 1049 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF708P17019 499 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 POU3F2P20265 443 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 SLC6A1P30531 599 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 OTX1P32242 354 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 BTCP35070 178 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 DDOSTP39656 456 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 RANBP1P43487 201 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 LHX2P50458 406 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ART1P52961 327 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 CLDN12P56749 244 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 CLDN18P56856 261 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 GRB2P62993 217 aaKnown RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 MRPS10P82664 201 aaKnown RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 DGCR2P98153 550 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 DYRK1AQ13627 763 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 KLF9Q13886 244 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 TGIF1Q15583 401 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 BCL2A1Q16548 175 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 RSPO1Q2MKA7 263 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 KRTAP27-1Q3LI81 207 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 CCDC92Q53HC0 331 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 PDSS1Q5T2R2 415 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 RIPPLY2Q5TAB7 128 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 GLT8D1Q68CQ7 371 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 SLC25A25Q6KCM7 469 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ANKRD16Q6P6B7 361 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 GALNT16Q8N428 558 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 TMEM251Q8N6I4 163 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 IL22RA1Q8N6P7 574 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ZFP62Q8NB50 900 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 PLPP7Q8NBV4 271 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 CLEC1AQ8NC01 280 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 SYNPRQ8TBG9 265 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 C15orf40Q8WUR7 153 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 HAS2Q92819 552 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 CPNE4Q96A23 557 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 SCMH1Q96GD3 660 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 SMAD5Q99717 465 aaKnown RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 C7orf50Q9BRJ6 194 aaKnown RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 MARVELD1Q9BSK0 173 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 HES7Q9BYE0 225 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 TTTY12Q9BZ98 90 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 HDHD2Q9H0R4 259 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 MMP28Q9H239 520 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 RNF121Q9H920 327 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ACKR4Q9NPB9 350 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF275Q9NSD4 429 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 PLA2G3Q9NZ20 509 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF319Q9P2F9 582 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 B4GALT7Q9UBV7 327 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 GTF2A1LQ9UNN4 478 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 POLR1DQ9Y2S0 133 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 KLF13Q9Y2Y9 288 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-203ENST00000350034 A0A0B4J293 547 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 LOC100289279A0A1B0GTE1 492 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 CIB4A0PJX0 185 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 MEIOCA2RUB1 952 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 HMX3A6NHT5 357 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 PCNX2A6NKB5 2137 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 H3BSH0 61 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 GABARAPH6UMI1 98 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 XRCC3O43542 346 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 LMX1BO60663 402 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 CELA3AP09093 270 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 CST2P09228 141 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 CD3GP09693 182 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 LIPCP11150 499 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 ANOS1P23352 680 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 CDK2P24941 298 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 HLA-DMAP28067 261 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 HSD11B1P28845 292 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 EIF1AXP47813 144 aaKnown RBP6.09□□□□□ -1.43
TRIM55-203ENST00000350034 POU3F4P49335 361 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF84P51523 738 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 RRADP55042 308 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF121P58317 390 aaPredicted RBP6.09□□□□□ -1.43
TRIM55-203ENST00000350034 TAS2R20P59543 309 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 BTG1P62324 171 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 PLA2G7Q13093 441 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 STK11Q15831 433 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 RAB11BQ15907 218 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 SGCAQ16586 387 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 C2orf76Q3KRA6 126 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 ATP1A1-AS1Q5TC04 95 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF57Q68EA5 555 aaPredicted RBP6.09□□□□□ -1.43
TRIM55-203ENST00000350034 PLET1Q6UQ28 207 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF813Q6ZN06 617 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 LINC00696Q6ZRV3 163 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 LINGO2Q7L985 606 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 AAED1Q7RTV5 226 aa6.09□□□□□ -1.43
TRIM55-203ENST00000350034 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms