RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MT-ND5P03915 603 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 ERCC1P07992 297 aaPredicted RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 H2BFMP0C1H6 154 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 OR4A8P0C604 315 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 FAM157BP0CG42 384 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 HSD11B1P28845 292 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 GCH1P30793 250 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 THBS4P35443 961 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 CAPGP40121 348 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 RPS27P42677 84 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 MTNR1AP48039 350 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 SLC6A9P48067 706 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 EVX1P49640 407 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 SNRPD2P62316 118 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 MALLQ13021 153 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 DEGS2Q6QHC5 323 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 LYPD4Q6UWN0 246 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 B3GLCTQ6Y288 498 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 BCDIN3DQ7Z5W3 292 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 C8orf59Q8N0T1 100 aaPredicted RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 OR1J1Q8NGS3 322 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 ABHD4Q8TB40 342 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 UBE2FQ969M7 185 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 APOBEC3DQ96AK3 386 aaPredicted RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 TRMT61AQ96FX7 289 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 MRPL48Q96GC5 212 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 MAP6Q96JE9 813 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 KCNJ15Q99712 375 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 ABHD6Q9BV23 337 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 MROQ9BYG7 248 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 CBLN4Q9NTU7 201 aa10.21□□□□□ -0.77
SNCA-202ENST00000345009 DDX28Q9NUL7 540 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 RPL36Q9Y3U8 105 aaKnown RBP10.21□□□□□ -0.77
SNCA-202ENST00000345009 USF3Q68DE3 2245 aa10.21□□□□□ -0.78
SNCA-202ENST00000345009 TEX15Q9BXT5 2789 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 NBPF19A0A087WUL8 3843 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 CCDC182A6NF36 153 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ZNF670-ZNF695F2Z2N8 137 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 M0R135 149 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 DLGAP1O14490 977 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ZNF254O75437 659 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 MRPL3P09001 348 aaKnown RBP10.2□□□□□ -0.78
SNCA-202ENST00000345009 SBK2P0C263 348 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 OR2T7P0C7T2 308 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 DANCRP0C864 163 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ALOX5APP20292 161 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
SNCA-202ENST00000345009 PPP1CBP62140 327 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 EFNB3Q15768 340 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ZNF691Q5VV52 312 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 DRAM2Q6UX65 266 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 KRT77Q7Z794 578 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 DTX2Q86UW9 622 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 SLC35F2Q8IXU6 374 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ENTHD1Q8IYW4 607 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 PAQR4Q8N4S7 273 aaPredicted RBP10.2□□□□□ -0.78
SNCA-202ENST00000345009 OR51G2Q8NGK0 314 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 OR2T27Q8NH04 317 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 SYNPRQ8TBG9 265 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 ST7LQ8TDW4 575 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 RNF133Q8WVZ7 376 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 MRPL24Q96A35 216 aaKnown RBP10.2□□□□□ -0.78
SNCA-202ENST00000345009 ZNF799Q96GE5 643 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 RASSF4Q9H2L5 321 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 OR51B6Q9H340 312 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 BEX4Q9NWD9 120 aaPredicted RBP10.2□□□□□ -0.78
SNCA-202ENST00000345009 SLCO1C1Q9NYB5 712 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 DUSP13Q9UII6 198 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 PLEKHA6Q9Y2H5 1048 aa10.2□□□□□ -0.78
SNCA-202ENST00000345009 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 SMPD2O60906 423 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ATE1O95260 518 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 FADS2O95864 444 aaKnown RBP10.19□□□□□ -0.78
SNCA-202ENST00000345009 LCATP04180 440 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 SOD3P08294 240 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ACSM4P0C7M7 580 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 LIPAP38571 399 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 VHLP40337 213 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ACTC1P68032 377 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ACTA1P68133 377 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ADARB1P78563 741 aaKnown RBP10.19□□□□□ -0.78
SNCA-202ENST00000345009 KLHL22Q53GT1 634 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 SPATC1Q76KD6 591 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ZNF101Q8IZC7 436 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ZNF283Q8N7M2 679 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 OR10H4Q8NGA5 316 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 OR52H1Q8NGJ2 320 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 NRG4Q8WWG1 115 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 SLC7A6Q92536 515 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 NRGNQ92686 78 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 TFAP2CQ92754 450 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 MBD6Q96DN6 1003 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 RNFT2Q96EX2 444 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 LIME1Q9H400 295 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 ADGRL4Q9HBW9 690 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 PNRC2Q9NPJ4 139 aaKnown RBP10.19□□□□□ -0.78
SNCA-202ENST00000345009 IKZF2Q9UKS7 526 aa10.19□□□□□ -0.78
SNCA-202ENST00000345009 MAST4O15021 2626 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms