RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SLC9A3R2Q15599 337 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 RNF219Q5W0B1 726 aaPredicted RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 FAM180AQ6UWF9 173 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF627Q7L945 461 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 COMMD6Q7Z4G1 85 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 KIR2DL5AQ8N109 375 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 STPG4Q8N801 248 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 CDS1Q92903 461 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ZG16BQ96DA0 208 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 CDC6Q99741 560 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SGPP1Q9BX95 441 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SH3BGRL3Q9H299 93 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ZDHHC6Q9H6R6 413 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 WDR90Q96KV7 1748 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PLXND1Q9Y4D7 1925 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC22A31A6NKX4 558 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 H7BY64 318 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ERAL1O75616 437 aaKnown RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 TK1P04183 234 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 KLK1P06870 262 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 NR2F1P10589 423 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 HOXB2P14652 356 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 HOXC8P31273 242 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PRSS3P35030 304 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 IDH3GP51553 393 aaPredicted RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 TAS2R38P59533 333 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 BTN3A2P78410 334 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SRSF5Q13243 272 aaKnown RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF260Q3ZCT1 412 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 MS4A13Q5J8X5 152 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PRAMEF20Q5VT98 475 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 CST9Q5W186 159 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC22A25Q6T423 547 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 MEX3BQ6ZN04 569 aaKnown RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 OR9K2Q8NGE7 335 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 MRGPRDQ8TDS7 321 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PRRC1Q96M27 445 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PHB2Q99623 299 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SF3B5Q9BWJ5 86 aaKnown RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 UPB1Q9UBR1 384 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 TRAV8-7A0A075B6U6 113 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 TRAV34A0A0B4J273 112 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ANKRD66B4E2M5 251 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 PIRO00625 290 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 KDELR3O43731 214 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 CTAG2O75638 210 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 WNT11O96014 354 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 RAB40ALP0C0E4 278 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 CTHP32929 405 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC25A1P53007 311 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 CLDN2P57739 230 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 CCL20P78556 96 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 IQCJQ1A5X6 159 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 CCSMST1Q4G0I0 132 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 RAB41Q5JT25 222 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 UNQ5815/PRO19632Q6UWF5 114 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 UMODL1-AS1Q8N2C9 162 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ACOT4Q8N9L9 421 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 NECAP1Q8NC96 275 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 RNASEH2CQ8TDP1 164 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 RAB40AQ8WXH6 277 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ASB13Q8WXK3 278 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF2Q9BSG1 426 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF581Q9P0T4 197 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 TSPAN11A1L157 253 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 FITM1A5D6W6 292 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF860A6NHJ4 632 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 PPICP45877 212 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 NANOS3P60323 173 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 PFN3P60673 137 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 VAMP2P63027 116 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 SRSF4Q08170 494 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF763Q0D2J5 394 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 GBGT1Q8N5D6 347 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 MRGPRFQ96AM1 343 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 HIST1H2AAQ96QV6 131 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ABHD14AQ9BUJ0 271 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ARV1Q9H2C2 271 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 TAAR2Q9P1P5 351 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 USP36Q9P275 1121 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 FBXL17Q9UF56 701 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 MSRAQ9UJ68 235 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 A0A1B0GVT2 93 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 AHSA1O95433 338 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 GCGP01275 180 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 APODP05090 189 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 CD55P08174 381 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 TDGF1P13385 188 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF7P17097 686 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 NDUFV2P19404 249 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 GABRR1P24046 479 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 KLF3P57682 345 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 TAS2R43P59537 309 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 SIRPAP78324 504 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 PLAURQ03405 335 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 GGTA1PQ4G0N0 100 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms