RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ZNF503-AS2A6NEH8 195 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 M0R135 149 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 SRSF10O75494 262 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 SERPINA5P05154 406 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 PPP3CBP16298 524 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 STOMP27105 288 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 PSMB10P40306 273 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 CX3CR1P49238 355 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 GALK2Q01415 458 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 SSX1Q16384 188 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 BCL2L15Q5TBC7 163 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 CATSPERDQ86XM0 798 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF283Q8N7M2 679 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 WDR31Q8NA23 367 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 S100PBPQ96BU1 408 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 YIPF6Q96EC8 236 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF799Q96GE5 643 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 DCLRE1CQ96SD1 692 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 ACTR6Q9GZN1 396 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 COMMD4Q9H0A8 199 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 NOX3Q9HBY0 568 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 FAM206AQ9NX38 181 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 NUFIP1Q9UHK0 495 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 GRIP1Q9Y3R0 1128 aa12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 IGKV3-15P01624 115 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 CBR1P16152 277 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 APLNRP35414 380 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 TGFBR2P37173 567 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 SLC6A9P48067 706 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 TSC22D1Q15714 1073 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 XKRXQ6PP77 449 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 ARL9Q6T311 187 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 ZFP41Q8N8Y5 198 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 OR52H1Q8NGJ2 320 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 OR5AK2Q8NH90 309 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF420Q8TAQ5 688 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 HSD17B8Q92506 261 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 BCL7BQ9BQE9 202 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 FUNDC2Q9BWH2 189 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 FAM192AQ9GZU8 254 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
NIPAL3-202ENST00000339255 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 DPPA5A6NC42 116 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 F5H5K5 113 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 NOL3O60936 208 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 HLA-DPB1P04440 258 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 UBCP0CG48 685 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF14P17017 642 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 GALP22466 123 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 APEX1P27695 318 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 CCKARP32238 428 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 PRKXP51817 358 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF121P58317 390 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 TUBA1BP68363 451 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 MFGE8Q08431 387 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 FAM27E3Q08E93 113 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 WDR38Q5JTN6 314 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF704Q6ZNC4 412 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 TUBA1AQ71U36 451 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 OR1J2Q8NGS2 313 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 RAB2BQ8WUD1 216 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 GHSRQ92847 366 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 RNASE6Q93091 150 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 PGLYRP3Q96LB9 341 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 GTF2A1LQ9UNN4 478 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 SLC25A15Q9Y619 301 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 SIRT4Q9Y6E7 314 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 J3QW42 95 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF701M0R085 212 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZFPL1O95159 310 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 PNPP00491 289 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 SERPINA3P01011 423 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ISG15P05161 165 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ACSM4P0C7M7 580 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 TMBIM6P55061 237 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 PPA1Q15181 289 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 TBC1D28Q2M2D7 210 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 RSPO1Q2MKA7 263 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 YIF1BQ5BJH7 314 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 GDPGP1Q6ZNW5 385 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ANKRD13BQ86YJ7 626 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF584Q8IVC4 421 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ELMOD2Q8IZ81 293 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 PRSS35Q8N3Z0 413 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF808Q8N4W9 903 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF676Q8N7Q3 588 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 SLC30A7Q8NEW0 376 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
NIPAL3-202ENST00000339255 THRSPQ92748 146 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms